Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_031074.1
Length=92580
Score E
Sequences producing significant alignments: (Bits) Value
seq2290 201 7e-47
>seq2290
Length=1989
Score = 201 bits (222), Expect = 7e-47
Identities = 307/431 (71%), Gaps = 10/431 (2%)
Strand=Plus/Minus
Query 1003 CGGCGTCACCATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGG 1062
|||||| |||||||||| || |||||||||| | ||| || || || || ||||| ||
Sbjct 1247 CGGCGTATCCATCTGGGATGAATGGGCCGACGAGGACGGCAATCTGGGCCCGGTCTATGG 1188
Query 1063 CGCGCAGTGGCGGCACTGGCATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTC 1122
|| ||| ||||| ||||| ||| | || | ||||| || |||||||||
Sbjct 1187 CGTGCAATGGCGCTCCTGGC----CGACCCCCGACGGTCGTCAC--ATCGACCAGATCA- 1135
Query 1123 GGCCGCCG-TGGAGCTGCTTCGCGAGGACCCTGACTCGCGCCGGAACGTGGTATCCGCAT 1181
| | | | |||| | | ||||| || | || |||||||| || | || || || |
Sbjct 1134 GCCAGTTGGTGGAACAGATTCGCAAGAATCCCGACTCGCGTCGCCTGATCGTCTCGGCCT 1075
Query 1182 GGAACGTCGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGT 1241
||||||| | || | || | ||||| || | ||| |||||| | |||||||| | |
Sbjct 1074 GGAACGTGGCGGATGTGGGCCAGATGGCTCTGCCCCCTTGCCACGCCCTGTTCCAGTTCT 1015
Query 1242 ACGTCGTCGACGGCCGGCTCTCGCTGC-AGGTCTACCAGCGCAGCGCGGACATGTTCCTC 1300
| || | ||| ||| ||| || |||| || ||||||||||||| ||||| || |||||
Sbjct 1014 ATGTAGCCGATGGCAAGCTGTC-CTGCCAGCTCTACCAGCGCAGTGCGGATATTTTCCTG 956
Query 1301 GGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCC 1360
|||||||| |||||||||||| ||||| || || | |||||| | || |||||
Sbjct 955 GGTGTGCCCTTCAATATCGCCAGCTACGCTCTGCTGACCCACATGATGGCCCAGCAATGT 896
Query 1361 GGCCTGCGGGTGGGTGAGCTGATCTGGACCGGCGGCGACTGCCACATCTACAACAACCAC 1420
| ||| ||||| || | || ||||| ||||||||||||||| | || |||||||
Sbjct 895 GATCTGGAAGTGGGCGACTTCATTTGGACGGGCGGCGACTGCCACCTGTATTCCAACCAC 836
Query 1421 GTCGACCAGGC 1431
|||| || ||
Sbjct 835 TTCGAGCAAGC 825
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 296104095666510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |