Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq2290 201 7e-47 >seq2290 Length=1989 Score = 201 bits (222), Expect = 7e-47 Identities = 307/431 (71%), Gaps = 10/431 (2%) Strand=Plus/Minus Query 1003 CGGCGTCACCATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGG 1062 |||||| |||||||||| || |||||||||| | ||| || || || || ||||| || Sbjct 1247 CGGCGTATCCATCTGGGATGAATGGGCCGACGAGGACGGCAATCTGGGCCCGGTCTATGG 1188 Query 1063 CGCGCAGTGGCGGCACTGGCATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTC 1122 || ||| ||||| ||||| ||| | || | ||||| || ||||||||| Sbjct 1187 CGTGCAATGGCGCTCCTGGC----CGACCCCCGACGGTCGTCAC--ATCGACCAGATCA- 1135 Query 1123 GGCCGCCG-TGGAGCTGCTTCGCGAGGACCCTGACTCGCGCCGGAACGTGGTATCCGCAT 1181 | | | | |||| | | ||||| || | || |||||||| || | || || || | Sbjct 1134 GCCAGTTGGTGGAACAGATTCGCAAGAATCCCGACTCGCGTCGCCTGATCGTCTCGGCCT 1075 Query 1182 GGAACGTCGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGT 1241 ||||||| | || | || | ||||| || | ||| |||||| | |||||||| | | Sbjct 1074 GGAACGTGGCGGATGTGGGCCAGATGGCTCTGCCCCCTTGCCACGCCCTGTTCCAGTTCT 1015 Query 1242 ACGTCGTCGACGGCCGGCTCTCGCTGC-AGGTCTACCAGCGCAGCGCGGACATGTTCCTC 1300 | || | ||| ||| ||| || |||| || ||||||||||||| ||||| || ||||| Sbjct 1014 ATGTAGCCGATGGCAAGCTGTC-CTGCCAGCTCTACCAGCGCAGTGCGGATATTTTCCTG 956 Query 1301 GGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCC 1360 |||||||| |||||||||||| ||||| || || | |||||| | || ||||| Sbjct 955 GGTGTGCCCTTCAATATCGCCAGCTACGCTCTGCTGACCCACATGATGGCCCAGCAATGT 896 Query 1361 GGCCTGCGGGTGGGTGAGCTGATCTGGACCGGCGGCGACTGCCACATCTACAACAACCAC 1420 | ||| ||||| || | || ||||| ||||||||||||||| | || ||||||| Sbjct 895 GATCTGGAAGTGGGCGACTTCATTTGGACGGGCGGCGACTGCCACCTGTATTCCAACCAC 836 Query 1421 GTCGACCAGGC 1431 |||| || || Sbjct 835 TTCGAGCAAGC 825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296104095666510