Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_031078.1 Length=50082 Score E Sequences producing significant alignments: (Bits) Value seq5543 174 5e-39 >seq5543 Length=16390 Score = 174 bits (192), Expect = 5e-39 Identities = 167/214 (78%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 40167 AAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATG 40226 ||||| | ||||| ||| ||||||||||||||||||||||||||||| || ||||| | Sbjct 8850 AAGTCCACGTCAAAGTCAGGCATGGACACGCGCTCGGGGTTCAGGAAACGTTCGAACAGC 8909 Query 40227 AGCCCGTGCGGGATGGGGTCCAGGTCTGTGATGCCGAGGCAGTAGGCGACCAGCGAACCG 40286 | | | | | |||||||||||| || || || | || |||||| ||||| ||||| Sbjct 8910 AAGTCATAGCGCAAGGGGTCCAGGTCGGTAATCCCCATGCTGTAGGCCACCAGGGAACCC 8969 Query 40287 GCAGCCGAGCCACGTCCGGGTCCGACCCACACGCCGTTCTCCTTGGCCCAGCCGATGAAG 40346 ||| ||||||| || || ||||| || |||||| || | |||| ||||| |||||| Sbjct 8970 GCACCCGAGCCTCGGCCTGGTCCTACGGGCACGCCATTGTGCTTGCCCCAGTTAATGAAG 9029 Query 40347 TCGGCGACGACCAGGAAGTAGGACGGGAACCCCA 40380 || || |||| |||||||||| ||||||||||| Sbjct 9030 TCCGCCACGATCAGGAAGTAGCCCGGGAACCCCA 9063 Score = 84.2 bits (92), Expect = 7e-12 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 39203 CTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCTCGGCGGAGAAGGTCGGCCTGACC 39262 |||||||| |||||||||| |||||||||||||| || || || | |||||| ||| Sbjct 7808 CTTGGCCATTTCCTCGGGCTTTTTCTTGCCCATGGCACGACGCAGCAAGTCGGCACCACC 7867 Query 39263 CAGGCTGTACCCAGCGAGGATCTGTGCCGCCTTCTGCACCTGCTCCTGGTAGATGACCAG 39322 ||| ||| ||| ||| ||||| | | | |||||| |||||||||| | || Sbjct 7868 CAGCGAGTAGCCACCGATAATCTGCGAGATCAGCATCACCTGTTCCTGGTAGACAATCAC 7927 Query 39323 CCCGTAGGT 39331 ||||||||| Sbjct 7928 CCCGTAGGT 7936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160126518443280