Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_031087.1 Length=168272 Score E Sequences producing significant alignments: (Bits) Value seq2257 167 3e-36 >seq2257 Length=8409 Score = 167 bits (184), Expect = 3e-36 Identities = 289/415 (70%), Gaps = 10/415 (2%) Strand=Plus/Minus Query 141255 TTAATCTGAACGCCATAATCTAAATGACGAATACGGTTTTCATCTACACCTTTGTTGTTC 141314 || |||||||| || || || || ||||||||||||||||| || ||||| ||||||| Sbjct 5882 TTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTC 5823 Query 141315 TTAAGTACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAGTGTCGCCGCG 141374 || || || || || |||| ||||||| |||||| || || ||| ||| || ||||| Sbjct 5822 TTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGCA 5763 Query 141375 CCACCACGGACTCCACCTTGGGAGCAGGATTTAACTGCTGTTTGGAAGTGTTTCCAGAAA 141434 |||||||| || || ||||| |||||||| || || || | ||||| || |||| Sbjct 5762 CCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAAC 5703 Query 141435 GGAATAACTCCAGTATGTTTGACTTCACCGAATCCAATTTTTGAACCCTCGGCGCGAATC 141494 || | || || |||| ||||||| | ||||| || |||||||||| Sbjct 5702 GGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGAATG 5643 Query 141495 ATGCCTGCATTAATACCAATACCTGCACGCTTACTGATGTATTTCGTAATTGATGCAGCA 141554 ||| |||| ||||| ||||| ||||||| ||| | || | ||| || Sbjct 5642 CGGCCACCATTGATACCGATACCGGCACGCT--GTGACACGTAACG--AACAATGGCGCT 5587 Query 141555 GCTTCGT-TAATTGA----ATTAAGACTATCACCACCTTCAATAACCACGCATGAACTGA 141609 | |||| ||||| | || || || ||| ||| || | |||||| || |||| Sbjct 5586 G-GTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGA 5528 Query 141610 ACTGGCGTGTCGGAGTACGAACACCAGACATAATTGGTGTTGGCAATGAAATCTT 141664 ||||||| || || || || || |||| ||| || || || ||||| |||||||| Sbjct 5527 ACTGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCTT 5473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538291863107200