Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_031087.1
Length=168272
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 167 3e-36
>seq2257
Length=8409
Score = 167 bits (184), Expect = 3e-36
Identities = 289/415 (70%), Gaps = 10/415 (2%)
Strand=Plus/Minus
Query 141255 TTAATCTGAACGCCATAATCTAAATGACGAATACGGTTTTCATCTACACCTTTGTTGTTC 141314
|| |||||||| || || || || ||||||||||||||||| || ||||| |||||||
Sbjct 5882 TTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTC 5823
Query 141315 TTAAGTACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAGTGTCGCCGCG 141374
|| || || || || |||| ||||||| |||||| || || ||| ||| || |||||
Sbjct 5822 TTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGCA 5763
Query 141375 CCACCACGGACTCCACCTTGGGAGCAGGATTTAACTGCTGTTTGGAAGTGTTTCCAGAAA 141434
|||||||| || || ||||| |||||||| || || || | ||||| || ||||
Sbjct 5762 CCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAAC 5703
Query 141435 GGAATAACTCCAGTATGTTTGACTTCACCGAATCCAATTTTTGAACCCTCGGCGCGAATC 141494
|| | || || |||| ||||||| | ||||| || ||||||||||
Sbjct 5702 GGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGAATG 5643
Query 141495 ATGCCTGCATTAATACCAATACCTGCACGCTTACTGATGTATTTCGTAATTGATGCAGCA 141554
||| |||| ||||| ||||| ||||||| ||| | || | ||| ||
Sbjct 5642 CGGCCACCATTGATACCGATACCGGCACGCT--GTGACACGTAACG--AACAATGGCGCT 5587
Query 141555 GCTTCGT-TAATTGA----ATTAAGACTATCACCACCTTCAATAACCACGCATGAACTGA 141609
| |||| ||||| | || || || ||| ||| || | |||||| || ||||
Sbjct 5586 G-GTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGA 5528
Query 141610 ACTGGCGTGTCGGAGTACGAACACCAGACATAATTGGTGTTGGCAATGAAATCTT 141664
||||||| || || || || || |||| ||| || || || ||||| ||||||||
Sbjct 5527 ACTGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCTT 5473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 538291863107200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |