Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_031095.1 Length=168758 Score E Sequences producing significant alignments: (Bits) Value seq2257 159 4e-34 >seq2257 Length=8409 Score = 159 bits (176), Expect = 4e-34 Identities = 286/413 (69%), Gaps = 6/413 (1%) Strand=Plus/Plus Query 136382 AAGATTTCATTGCCAACACCAATTATGTCTGGTGTTCGTACTCCAACCCGCCAGTTCAGT 136441 |||||||| ||||| || || || ||| |||| || || || || || ||||||||||| Sbjct 5473 AAGATTTCCTTGCCCACGCCCATCATGGCTGGCGTGCGCACACCCACTCGCCAGTTCAGC 5532 Query 136442 TCATGCGTAGTTATTGAAGGTGGTGATAGTCTTAATTCAATTAACG--AAGCCGCTGCAT 136499 || ||||| | || ||| ||| || || || | || || | | | | | || Sbjct 5533 TCTTGCGTGCTGATCGAATGTGACGACAGCCTGGACAGCATCAATGCCACGAC-CAGCGC 5591 Query 136500 CAAT-TACGAAATACATTAGTAAGCGTGCTGGTATTGGTATTAATGCGGGGATGATTCGT 136558 || | | || ||| | ||||||| ||||| ||||| |||| || ||||| Sbjct 5592 CATTGTTCGT--TACGTGTCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGC 5649 Query 136559 GCAGAAGGATCAAAAATTGGATTCGGTGAAGTCAAGCATACTGGTGTTATTCCTTTCTGG 136618 || | ||| ||||| | ||||||| | || || ||| | || |||| Sbjct 5650 GCCGTAGGCAGCGAAATTCGTGGTGGTGAAGCACAACACACGGGTTGCCTGCCGTTCTTC 5709 Query 136619 AAACACTTCCAAACCGCAGTTAAGTCATGCTCCCAAGGCGGAGTCCGTGGTGGTGCAGCT 136678 || ||||| | || || ||||| ||||| |||||||| || ||||||||||| || Sbjct 5710 AAGATGTTCCAGGCTGCGGTGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCA 5769 Query 136679 ACACTGTATTATCCGATGTGGCACTTGGAAGTTGAAAACCTCCTCGTACTTAAGAACAAC 136738 || ||| || || ||||||||| ||||||| |||| || || || || ||||||||| Sbjct 5770 ACCTTGTTCTACCCCATGTGGCACCTGGAAGTGGAAACACTGCTGGTTCTGAAGAACAAC 5829 Query 136739 AAAGGTGTAGATGAAAACCGTATTCGCCATTTAGATTATGGTGTTCAGATTAA 136791 ||||| || |||||||||||||| || || || || ||||||||||| || Sbjct 5830 CGTGGTGTGGAAGAAAACCGTATTCGTCACTTGGACTACGGTGTTCAGATCAA 5882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539846917112800