Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_031127.1 Length=240761 Score E Sequences producing significant alignments: (Bits) Value seq2290 122 1e-22 >seq2290 Length=1989 Score = 122 bits (134), Expect = 1e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 196749 CTGTCCTGTCAGCTTTACCAGCGCAGTGCAGACGTCTTCCTCGGTGTCCCGTTCAACATC 196808 |||||||| ||||| |||||||||||||| || | ||||| ||||| || ||||| ||| Sbjct 997 CTGTCCTGCCAGCTCTACCAGCGCAGTGCGGATATTTTCCTGGGTGTGCCCTTCAATATC 938 Query 196809 GCTTCGTACGCTCTGTTGGTTCACATGGTGGCACAGCAGGTCAATATGGTGGCGGGTGAT 196868 || ||||||||| || |||||| |||| ||||| || ||| | ||| || Sbjct 937 GCCAGCTACGCTCTGCTGACCCACATGATGGCCCAGCAATGTGATCTGGAAGTGGGCGAC 878 Query 196869 TTCGTCTGGACGGGCGGCGATACCCATCTGTACTCTAACCATCTGGAACAGGCCACGTTG 196928 ||| | |||||||||||||| ||| ||||| || ||||| | || || ||| ||| Sbjct 877 TTCATTTGGACGGGCGGCGACTGCCACCTGTATTCCAACCACTTCGAGCAAGCCGAATTG 818 Query 196929 CAGCT 196933 ||||| Sbjct 817 CAGCT 813 Score = 89.7 bits (98), Expect = 8e-13 Identities = 169/246 (69%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 196065 AAAGCTGACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGAC 196124 |||| |||||| || || || ||||| | ||| | || || | || ||||| || || Sbjct 1420 AAAGGTGACCGCACAGGTACCGGCACGAACTCGGTATTTGGTCACCAAATGCGCTTCGAT 1361 Query 196125 CTG-CGCAAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCA 196183 ||| |||| || |||||| || |||||||||| ||| ||||| || ||| | Sbjct 1360 CTGTCGCAG-GGTTTCCCGTTGATCACCACCAAGAAGCTGCACACCCGCAGCATCTTTAT 1302 Query 196184 CGAACTGTTGTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGT 196243 ||| || ||||||| || ||| || |||| | | | ||| |||| | ||| Sbjct 1301 TGAATTGCTGTGGTTTTTGCGCGGTGAGTCCAATGTGCGCTGGCTGCAAGAGCGCGGCGT 1242 Query 196244 CAGTATCTGGGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCA 196303 ||||||||||| ||||| || || || ||| |||| ||||| ||||| || ||| Sbjct 1241 ATCCATCTGGGATGAATGGGCCGACGAGGACGGCAATCTGGGCCCGGTCTATGGCGTGCA 1182 Query 196304 GTGGCG 196309 ||||| Sbjct 1181 ATGGCG 1176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 770234887411600