Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_031127.1
Length=240761
Score E
Sequences producing significant alignments: (Bits) Value
seq2290 122 1e-22
>seq2290
Length=1989
Score = 122 bits (134), Expect = 1e-22
Identities = 138/185 (75%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 196749 CTGTCCTGTCAGCTTTACCAGCGCAGTGCAGACGTCTTCCTCGGTGTCCCGTTCAACATC 196808
|||||||| ||||| |||||||||||||| || | ||||| ||||| || ||||| |||
Sbjct 997 CTGTCCTGCCAGCTCTACCAGCGCAGTGCGGATATTTTCCTGGGTGTGCCCTTCAATATC 938
Query 196809 GCTTCGTACGCTCTGTTGGTTCACATGGTGGCACAGCAGGTCAATATGGTGGCGGGTGAT 196868
|| ||||||||| || |||||| |||| ||||| || ||| | ||| ||
Sbjct 937 GCCAGCTACGCTCTGCTGACCCACATGATGGCCCAGCAATGTGATCTGGAAGTGGGCGAC 878
Query 196869 TTCGTCTGGACGGGCGGCGATACCCATCTGTACTCTAACCATCTGGAACAGGCCACGTTG 196928
||| | |||||||||||||| ||| ||||| || ||||| | || || ||| |||
Sbjct 877 TTCATTTGGACGGGCGGCGACTGCCACCTGTATTCCAACCACTTCGAGCAAGCCGAATTG 818
Query 196929 CAGCT 196933
|||||
Sbjct 817 CAGCT 813
Score = 89.7 bits (98), Expect = 8e-13
Identities = 169/246 (69%), Gaps = 2/246 (1%)
Strand=Plus/Minus
Query 196065 AAAGCTGACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGAC 196124
|||| |||||| || || || ||||| | ||| | || || | || ||||| || ||
Sbjct 1420 AAAGGTGACCGCACAGGTACCGGCACGAACTCGGTATTTGGTCACCAAATGCGCTTCGAT 1361
Query 196125 CTG-CGCAAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCA 196183
||| |||| || |||||| || |||||||||| ||| ||||| || ||| |
Sbjct 1360 CTGTCGCAG-GGTTTCCCGTTGATCACCACCAAGAAGCTGCACACCCGCAGCATCTTTAT 1302
Query 196184 CGAACTGTTGTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGT 196243
||| || ||||||| || ||| || |||| | | | ||| |||| | |||
Sbjct 1301 TGAATTGCTGTGGTTTTTGCGCGGTGAGTCCAATGTGCGCTGGCTGCAAGAGCGCGGCGT 1242
Query 196244 CAGTATCTGGGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCA 196303
||||||||||| ||||| || || || ||| |||| ||||| ||||| || |||
Sbjct 1241 ATCCATCTGGGATGAATGGGCCGACGAGGACGGCAATCTGGGCCCGGTCTATGGCGTGCA 1182
Query 196304 GTGGCG 196309
|||||
Sbjct 1181 ATGGCG 1176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 770234887411600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |