Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_031128.1
Length=158081
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 109 6e-19
>seq2257
Length=8409
Score = 109 bits (120), Expect = 6e-19
Identities = 281/425 (66%), Gaps = 10/425 (2%)
Strand=Plus/Minus
Query 17233 CAGGCGCTCGAACATGACGCGGTTAATCTGAATCCCATAGTCGATACGGCGTTCACGGTT 17292
|||||||| | ||| | |||||| ||||||| || ||||| | | || ||||||
Sbjct 5904 CAGGCGCTGGTACAGCAAGCGGTTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTT 5845
Query 17293 CTCTTCCAATCCACGGTTGTTTTTGAGAACAACGACATCATCAAATTGATAATGCCAGAT 17352
||||||| ||||||||||| || ||||| | | || | || ||||| ||
Sbjct 5844 TTCTTCCACACCACGGTTGTTCTTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACAT 5785
Query 17353 GG----GAACATAGCATGTTGCCGATCCACCACGGATACCGCCTTGAGAGCAAGACTTCA 17408
|| ||||| | ||||||| |||||||| | |||||||| ||||| |||||||
Sbjct 5784 GGGGTAGAACA----AGGTTGCCGCACCACCACGCACGCCGCCTTGCGAGCAGGACTTCA 5729
Query 17409 GGGCA-CCAGTCAAATACTTGATGAATGGAACCAGACCTGTATGGACCATTTCCCCTTTA 17467
||| || | | || ||||| ||| || | ||| || || ||| || |
Sbjct 5728 CCGCAGCCTGGAACAT-CTTGAAGAACGGCAGGCAACCCGTGTGTTGTGCTTCACCACCA 5670
Query 17468 CGGATAGGGCTACCGATGCCACGAATTGCCCCAACATCGAATCCGATGCCAGCACGTTTG 17527
|| || ||| || | | | ||||| ||| ||| || ||||| || ||||| |
Sbjct 5669 CGAATTTCGCTGCCTACGGCGCGAATGCGGCCACCATTGATACCGATACCGGCACGCTGT 5610
Query 17528 GAAACATAATCCACGATGCTTTTCGCAGTGGCATTAATTGAGTCCAATGTATCACCAGTT 17587
|| || ||| || ||| | | |||||||| || ||||| | || || |
Sbjct 5609 GACACGTAACGAACAATGGCGCTGGTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACAT 5550
Query 17588 TTGATTAATACACAAGAGCTGAACTGTCGGGTCGGGGTGCGGACGCCGGACATAATAGGT 17647
| ||| | || |||||||||||||| || || || ||||| ||||| | ||| || ||
Sbjct 5549 TCGATCAGCACGCAAGAGCTGAACTGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGC 5490
Query 17648 GTTGG 17652
|| ||
Sbjct 5489 GTGGG 5485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505683724483600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |