Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq4015 197 9e-46 >seq4015 Length=3327 Score = 197 bits (218), Expect = 9e-46 Identities = 264/363 (73%), Gaps = 7/363 (2%) Strand=Plus/Plus Query 96703 GTTATCAAACCGTGAGTATTGGCCGTTAAAAGCCAATCTCACCGTGCCAATTGGGCCATT 96762 ||| || || || | ||| | |||| | || |||| | ||| ||| || ||||| || Sbjct 1119 GTTCTCGAAGCGCGTGTACTTGCCGATGAACGCCAGGCGCACGAAGCCGATGGGGCCGTT 1178 Query 96763 TCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCTATCCGGGTGATAAAC 96822 || ||||| ||||| || | |||||| |||||||| ||| | || ||||| || || Sbjct 1179 ACGCTGCTTGCCGATGATGATCTCGGCGATGCCCTTGTGCTCGGTCTCGGGGTGGTACAC 1238 Query 96823 TTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAATTGCTCCTGATTCACG 96882 |||||||| |||| |||||||||| ||| ||||||||||| || || || |||||||| Sbjct 1239 CTCGTCGCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCACCCGATTCACG 1298 Query 96883 TAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGATCGATTAAGTTGTGA 96942 || || || || ||||| || |||| | ||||| || || || || || || || || Sbjct 1299 CAAGTCGGAGTTCACCGGGCGCTTGTTGGGGCGCTGCTCGAGGGAGCGGTTGAGCTGCGA 1358 Query 96943 CAATGCCACCACC-GGTACTTGTAATTCCTTCGCCAACGCCTTCAGTGAGCGAGAAATCT 97001 || || | ||| || | ||| |||||||| |||| ||||| || ||||| || |||| Sbjct 1359 CAGGGCGATGACCGGGCAGTTG-AATTCCTTGGCCAGGGCCTTGAGCGAGCGCGAGATCT 1417 Query 97002 CGGCAATTTCCAGCGTTCGGTTATC----TTGCAGCTCCGGGACGCGCATAAGTTGCAGG 97057 ||| ||| || || ||||| || || ||| |||||| |||| ||||||||| Sbjct 1418 CGGAAATCTCGTTGGTACGGTTGTCACCGCTGGAGC-CCGGGATCTGCATCAGTTGCAGG 1476 Query 97058 TAG 97060 ||| Sbjct 1477 TAG 1479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330868913416660