Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_031224.1
Length=59443
Score E
Sequences producing significant alignments: (Bits) Value
seq2290 123 9e-24
>seq2290
Length=1989
Score = 123 bits (136), Expect = 9e-24
Identities = 336/504 (67%), Gaps = 14/504 (3%)
Strand=Plus/Minus
Query 51808 AGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATTTCC-CATCAGTGGTCGGGGAGTTG 51866
|||| |||||| | ||||||||||||||| |||| || || || | | || |||
Sbjct 1353 AGGGTTTCCCGTTGATCACCACCAAGAAGCTGCACACCCGCAGCA-TCTTTATTGAATTG 1295
Query 51867 CTGTGGTTGCTTTCGGGCTCTA-CGAACGTCAACGATCTCCATAAGTACGGCGTCAGCAT 51925
|||||||| || || | | | || || | || || || |||||| |||
Sbjct 1294 CTGTGGTTT-TTGCGCGGTGAGTCCAATGTGCGCTGGCTGCAAGAGCGCGGCGTATCCAT 1236
Query 51926 TTGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAGCAGTGGCG 51985
||||| |||||||| || || | || || ||||| || || ||||| ||| |||||
Sbjct 1235 CTGGGATGAATGGGCCGACGAGGACGGCAATCTGGGCCCGGTCTATGGCGTGCAATGGCG 1176
Query 51986 TAGTTGG--GATGCTGGTGG--CGGCAAGGTCATCGATCAGATCCATGAAGTCGTCAAAT 52041
||| || | | | || || |||||| |||||| | | || ||
Sbjct 1175 CTCCTGGCCGACCCCCGACGGTCGTCA----CATCGACCAGATCAGCCAGTTGGTGGAAC 1120
Query 52042 CAATTAAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAATGTGGGTGATT 52101
||| || |||| || || || | || ||||| || ||||| |||| |||
Sbjct 1119 AGATTCGCAAGAATCCCGACTCGCGTCGCCTGATCGTCTCGGCCTGGAACGTGGCGGATG 1060
Query 52102 TGGATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTA 52161
||| | ||||| || | || ||||| | || ||||| ||||||||||| || || |
Sbjct 1059 TGGGCCAGATGGCTCTGCCCCCTTGCCACGCCCTGTTCCAGTTCTATGTAGCCGATGGCA 1000
Query 52162 AGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACA 52221
|||| || ||||| | || ||||| ||| || || ||| |||| || || || || |
Sbjct 999 AGCTGTCCTGCCAGCTCTACCAGCGCAGTGCGGATATTTTCCTGGGTGTGCCCTTCAATA 940
Query 52222 TTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGT-TGGCCTTGATGTTGGT 52280
| |||||||| | ||||||| || |||| || | |||| | || || || || ||
Sbjct 939 TCGCCAGCTACGCTCTGCTGACCCACATGATGGCCC-AGCAATGTGATCTGGAAGTGGGC 881
Query 52281 GAATTCATTTGGACTGGTGGCGAC 52304
|| ||||||||||| || ||||||
Sbjct 880 GACTTCATTTGGACGGGCGGCGAC 857
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 190079047001100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |