Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq2290 123 9e-24 >seq2290 Length=1989 Score = 123 bits (136), Expect = 9e-24 Identities = 336/504 (67%), Gaps = 14/504 (3%) Strand=Plus/Minus Query 51808 AGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATTTCC-CATCAGTGGTCGGGGAGTTG 51866 |||| |||||| | ||||||||||||||| |||| || || || | | || ||| Sbjct 1353 AGGGTTTCCCGTTGATCACCACCAAGAAGCTGCACACCCGCAGCA-TCTTTATTGAATTG 1295 Query 51867 CTGTGGTTGCTTTCGGGCTCTA-CGAACGTCAACGATCTCCATAAGTACGGCGTCAGCAT 51925 |||||||| || || | | | || || | || || || |||||| ||| Sbjct 1294 CTGTGGTTT-TTGCGCGGTGAGTCCAATGTGCGCTGGCTGCAAGAGCGCGGCGTATCCAT 1236 Query 51926 TTGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAGCAGTGGCG 51985 ||||| |||||||| || || | || || ||||| || || ||||| ||| ||||| Sbjct 1235 CTGGGATGAATGGGCCGACGAGGACGGCAATCTGGGCCCGGTCTATGGCGTGCAATGGCG 1176 Query 51986 TAGTTGG--GATGCTGGTGG--CGGCAAGGTCATCGATCAGATCCATGAAGTCGTCAAAT 52041 ||| || | | | || || |||||| |||||| | | || || Sbjct 1175 CTCCTGGCCGACCCCCGACGGTCGTCA----CATCGACCAGATCAGCCAGTTGGTGGAAC 1120 Query 52042 CAATTAAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAATGTGGGTGATT 52101 ||| || |||| || || || | || ||||| || ||||| |||| ||| Sbjct 1119 AGATTCGCAAGAATCCCGACTCGCGTCGCCTGATCGTCTCGGCCTGGAACGTGGCGGATG 1060 Query 52102 TGGATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTA 52161 ||| | ||||| || | || ||||| | || ||||| ||||||||||| || || | Sbjct 1059 TGGGCCAGATGGCTCTGCCCCCTTGCCACGCCCTGTTCCAGTTCTATGTAGCCGATGGCA 1000 Query 52162 AGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACA 52221 |||| || ||||| | || ||||| ||| || || ||| |||| || || || || | Sbjct 999 AGCTGTCCTGCCAGCTCTACCAGCGCAGTGCGGATATTTTCCTGGGTGTGCCCTTCAATA 940 Query 52222 TTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGT-TGGCCTTGATGTTGGT 52280 | |||||||| | ||||||| || |||| || | |||| | || || || || || Sbjct 939 TCGCCAGCTACGCTCTGCTGACCCACATGATGGCCC-AGCAATGTGATCTGGAAGTGGGC 881 Query 52281 GAATTCATTTGGACTGGTGGCGAC 52304 || ||||||||||| || |||||| Sbjct 880 GACTTCATTTGGACGGGCGGCGAC 857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190079047001100