Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_031924.1 Length=47564 Score E Sequences producing significant alignments: (Bits) Value seq5432 95.1 4e-15 >seq5432 Length=1936 Score = 95.1 bits (104), Expect = 4e-15 Identities = 163/234 (70%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 36440 ACCACCAAGCATCTGCATCACGCCGCCCATCTGCGGAATGACAATCTCTGTGGTGTATCT 36499 |||||| |||| |||||| ||| ||| | || | || ||||| |||||||| | Sbjct 155 ACCACCCAGCAGCTGCATGGTGCCCTGCATGT-CG--ACGATGATCTCGGTGGTGTAACG 211 Query 36500 GTCTATTCCGTTGCTGTCAGTCCATTTACGAGTACGAAGCTGGCCTTCGATGTAAACCTG 36559 | || |||| | || ||| | || || | |||| ||| |||||||| ||||| Sbjct 212 CTTGATGCCGTCCTTTTC---CCACTCGCGGGTCTGCAGCTTGCCCTCGATGTACACCTG 268 Query 36560 CGAACCTTTTCGAAGGTATTCTCCTGCAACTTCCGCAAGTTTCCCGAATATGACAATACG 36619 |||||| || || ||||| || || |||| || |||| || ||||| || || ||| Sbjct 269 CGAACCCTTGCGCAGGTACTCGCCGGCAATCTCGGCAACCTTGCCGAACATCGAAACACG 328 Query 36620 ATGCCACTCTGTCTGTTCTTTCTTTTCTCCTGTCTGCTTATCTTTCCACTGCTC 36673 |||||||| || | || ||| | || |||||||| || |||||||||| Sbjct 329 GTGCCACTCGGTACGCTCGACCTTCTGGCCGGTCTGCTTGTCGGTCCACTGCTC 382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152069637030120