Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq5063 150 1e-31 seq2066 143 2e-29 seq4834 116 3e-21 seq471 82.4 5e-11 >seq5063 Length=4177 Score = 150 bits (166), Expect = 1e-31 Identities = 167/220 (76%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||| | |||||||||||| || ||||| ||||||||||| || | || ||| Sbjct 2596 AGTCGGAGCACCAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGG 2655 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || || || ||||| ||||| |||||||||||||| ||||||| || | |||||| Sbjct 2656 CCATCCTCGAGTTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGAATTCCTTCC 2715 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGT 44298 || ||| ||||| || | | |||| | |||||||||| || ||| || || | || Sbjct 2716 TTGTCCTGGATCTT-GGCCTTGACGTTCTCGATGGTGTCGGAGGCTTCGACTTCGAGGGT 2774 Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||| || || |||||||||||||||||||||||| Sbjct 2775 GATCGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATG 2814 Score = 132 bits (146), Expect = 3e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || |||||| ||||||||||| |||| || ||| | || || Sbjct 2229 ACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCG 2288 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| |||||||| ||||| ||||||| || | ||||| || ||| Sbjct 2289 AGTTGCTTTCCGGCGAAGATCAAGCGCTGTTGATCTGGGGGAATTCCTTCTTTGTCCTGG 2348 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| || | | |||| | || ||||||| || ||| || || | || |||||||| Sbjct 2349 ATCTT-GGCCTTGACGTTCTCGATCGTGTCGGAGGCTTCGACTTCGAGGGTGATCGTCTT 2407 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| |||||||| ||||||||||| Sbjct 2408 GCCGGTGAGAGTCTTCACAAAGATTTGCAT 2437 Score = 129 bits (142), Expect = 4e-25 Identities = 115/144 (80%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 44194 CTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTT 44253 ||| ||||||||||||| ||||||||||||| ||| | |||||||| ||| ||||| Sbjct 3009 CTTACCGGCAAAGATCAGTCGCTGCTGATCTGGAGGGATTCCTTCCTTGTCCTGGATCTT 3068 Query 44254 CTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGT 44313 ||||| | | ||||| |||| | ||| ||||||| || |||||||||||||| Sbjct 3069 TGCCTTCACATTCTCGATGGTATCGGAAGCTTCGACCTCCAGAGTGATCGTCTTTCCCGT 3128 Query 44314 GAGGGTCTTCACGAAGATTTGCAT 44337 ||| |||||||||||||||||||| Sbjct 3129 GAGAGTCTTCACGAAGATTTGCAT 3152 Score = 125 bits (138), Expect = 5e-24 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||||||||| ||| |||||| ||||||||||| |||| ||| |||| |||| || Sbjct 1686 ACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCGTCTTCG 1745 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||||| ||||||||||| | || | || ||||| ||| Sbjct 1746 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCGGGTGGGATTCCCTCCTTGTCCTGA 1805 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| || | |||||||| | || ||| || || | || || |||||| Sbjct 1806 ATCTTGGCCTTCACATTTTCAATGGTGTCCGAGGCTTCGACTTCAAGAGTGATGGTCTTT 1865 Query 44309 CC 44310 || Sbjct 1866 CC 1867 Score = 89.7 bits (98), Expect = 4e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| |||||| ||||| ||||| || | ||| |||| |||| || Sbjct 1916 ACGAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTCCGAGAGAGTGCGCCCGTCTTCG 1975 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 |||||||| ||||||||||| | ||||||||||| | || | || ||||| ||| Sbjct 1976 AGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGATCGGGTGGGATTCCCTCCTTGTCC 2032 Score = 86.0 bits (94), Expect = 5e-12 Identities = 131/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || | |||| | |||| ||| || ||| |||||| ||||||||||| Sbjct 3147 TTGCATTCCACCGCGGAGTCGGAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTA 3206 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | ||| || |||| || |||||||| ||||||||||| | || ||||| || Sbjct 3207 GTCCGAGAGGGTACGTCCGTCTTCGAGCTGCTTTCCGGCAAAGATGAGGCGTTGCTGGTC 3266 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || || | |||||||| || ||||| || | | |||| | |||||||| | || Sbjct 3267 TGGGGGGATTCCTTCCTTGTCTTGGATCTT-GGCCTTGACGTTCTCGATGGTGTCCGAGG 3325 Query 44283 ATTC 44286 ||| Sbjct 3326 CTTC 3329 >seq2066 Length=2850 Score = 143 bits (158), Expect = 2e-29 Identities = 175/236 (74%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || | |||| | ||||||||||| ||| |||||| ||||||||||| Sbjct 837 TTGCATTCCACCGCGAAGTCGAAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTA 896 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | ||| || |||| || |||||||| ||||| ||||| | || |||||||| Sbjct 897 GTCCGAGAGGGTTCGTCCGTCTTCGAGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGATC 956 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || || | || ||||| || ||||| || | | |||| | |||||||||| || Sbjct 957 TGGGGGGATTCCCTCCTTGTCTTGGATCTT-GGCCTTGACGTTCTCAATGGTGTCGGAGG 1015 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| || || | || |||||||| || || ||||||||||||||||| |||||| Sbjct 1016 CTTCGACTTCGAGAGTGATCGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 1071 Score = 140 bits (154), Expect = 2e-28 Identities = 174/236 (74%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || | |||| | ||||||||||| || ||||||||||||||||| Sbjct 1426 TTGCATTCCACCGCGAAGTCGGAGAACCAGGTGAAGAGTCGATTCCTTTTGGATGTTGTA 1485 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | | | ||| | || || |||||||| ||||| ||||| | ||||| ||||| Sbjct 1486 GTCCGACAATGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGATC 1545 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || || | |||||||| ||| ||||| || | | |||| | |||||||| | || Sbjct 1546 TGGGGGAATGCCTTCCTTGTCCTGGATCTT-GGCCTTGACGTTCTCGATGGTGTCCGAGG 1604 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| || || | || |||||||| ||||| | ||||||||||||||| |||||| Sbjct 1605 CTTCGACTTCGAGGGTGATCGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCATG 1660 Score = 140 bits (154), Expect = 2e-28 Identities = 159/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || ||| |||||| ||||||||||| || | || ||| | || || Sbjct 1946 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCCTCG 2005 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| |||||||||||||| ||||||| || | |||||||| ||| Sbjct 2006 AGTTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGAATTCCTTCCTTGTCCTGG 2065 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| || | | |||| | |||||||| | || ||| || || | || |||||||| Sbjct 2066 ATCTT-GGCCTTGACGTTCTCGATGGTGTCCGAGGCTTCGACTTCGAGGGTGATCGTCTT 2124 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| | ||||||||||||||| |||||| Sbjct 2125 GCCCGTCAAGGTCTTCACGAAGATCTGCATG 2155 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||||||||| || ||||| ||||||||||| || | ||| || |||| || Sbjct 1223 ACCAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGTCCGTCTTCG 1282 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | || |||||||||| || | || ||||| ||| Sbjct 1283 AGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGG 1342 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| || | | |||| | ||||| || | | ||||| || | || |||||||| Sbjct 1343 ATCTT-GGCCTTGACGTTCTCGATGGTATCCGAAGCCTCCACTTCGAGGGTGATCGTCTT 1401 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||||||||||||||||||||| Sbjct 1402 GCCGGTCAGGGTCTTCACGAAGATTTGCAT 1431 Score = 118 bits (130), Expect = 8e-22 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 44195 TTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTC 44254 || ||||||||||| | ||||||||||||| ||| | |||||||| ||| ||||| Sbjct 343 TTACCGGCAAAGATGAGGCGCTGCTGATCTGGAGGGATTCCTTCCTTGTCCTGGATCTTG 402 Query 44255 TGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTG 44314 ||||| | | ||||| |||| | ||| ||||||| || |||||||| |||||| Sbjct 403 GCCTTCACATTCTCGATGGTATCGGAAGCTTCGACCTCCAGAGTGATCGTCTTGCCCGTG 462 Query 44315 AGGGTCTTCACGAAGATTTGCAT 44337 || |||||||||||||||||||| Sbjct 463 AGAGTCTTCACGAAGATTTGCAT 485 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || ||| |||||| ||||||||||| || | || ||| | || || Sbjct 2 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCG 61 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| ||||| | ||||| ||||||| || | |||||||| || Sbjct 62 AGTTGCTTTCCGGCGAAGATGAGGCGCTGTTGATCTGGGGGAATGCCTTCCTTGTCTTGA 121 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | |||||||| | | ||| || || | || |||||||| Sbjct 122 ATCTTCGCCTTGACATTCTCAATGGTGTCAGAAGCTTCGACTTCGAGAGTTATCGTCTTG 181 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||||||||||||||||||| Sbjct 182 CCAGTCAAGGTCTTCACGAAGATTTGCAT 210 Score = 105 bits (116), Expect = 5e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 44193 GCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCT 44252 |||| ||||||||||||| ||||||||||| | || | || ||||| ||| |||| Sbjct 2284 GCTTACCGGCAAAGATCAGGCGCTGCTGATCGGGCGGGATTCCCTCCTTGTCCTGGATCT 2343 Query 44253 TCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCG 44312 | ||||| | | |||||||||| | || ||||| | || || ||||| || | Sbjct 2344 TGGCCTTCACATTGTCGATGGTGTCGGAAGCCTCGACCTCAAGGGTGATGGTCTTCCCGG 2403 Query 44313 TGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||||||||||||||||||||| Sbjct 2404 TGAGGGTCTTCACGAAGATTTGCATG 2429 Score = 86.0 bits (94), Expect = 5e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 44236 TTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCAC 44295 |||||| ||| |||||| ||| | | | |||||||||| || ||| || |||| Sbjct 741 TTCCTTGTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCGGAGGCTTCGACTTCCAG 800 Query 44296 CGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||||||| |||||||| |||||||||||||||||||| Sbjct 801 GGTGATCGTCTTGCCCGTGAGAGTCTTCACGAAGATTTGCAT 842 >seq4834 Length=88581 Score = 116 bits (128), Expect = 3e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || ||| |||||| ||||||||||| |||| | ||| |||| || Sbjct 22336 ACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGATAACGTGCGGCCGTCCTCG 22395 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | || ||||| || | ||| | |||||||| || Sbjct 22396 AGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGGTCCGGAGGGATGCCTTCCTTATCTTGA 22455 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| |||| | |||| | || || || | || ||| || || | || || ||||| Sbjct 22456 ATCTTCGCCTTC-ACGTTCTCGATAGTATCCGAGGCTTCGACTTCAAGGGTGATTGTCTT 22514 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || |||||||||||||| |||||| Sbjct 22515 CCCGGTAAGCGTCTTCACGAAGATCTGCATG 22545 Score = 107 bits (118), Expect = 1e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || |||||| || |||||||| || | || || |||| || Sbjct 21131 ACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCTGAAAGAGTACGGCCGTCCTCA 21190 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| || ||||||||||| | ||||| || || | ||| | |||||||| || Sbjct 21191 AGCTGTTTTCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCTTCCTTATCTTGA 21250 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| |||| | |||| | || ||||| | | ||| || || | || || ||||| Sbjct 21251 ATCTTCGCCTTC-ACGTTCTCGATTGTGTCCGAAGCTTCGACTTCGAGGGTGATGGTCTT 21309 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| ||||| ||||| || |||||||||||| Sbjct 21310 TCCGGTGAGCGTCTTGACAAAGATTTGCATG 21340 >seq471 Length=2147 Score = 82.4 bits (90), Expect = 5e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 44193 GCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCT 44252 |||| ||||||||||||| ||||| ||||| | || | || ||||| ||| || | Sbjct 1948 GCTTACCGGCAAAGATCAGGCGCTGTTGATCAGGTGGGATTCCCTCCTTATCCTGGATTT 2007 Query 44253 TCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCG 44312 | ||||| || | ||||| || | | ||| || || | || || |||||||| | Sbjct 2008 TGGCCTTCACATTTTCGATGGTATCCGAAGCTTCGACTTCAAGAGTGATGGTCTTTCCTG 2067 Query 44313 TGAGGGTCTTCACGAAGATTTGCAT 44337 |||| ||||| |||||||| ||||| Sbjct 2068 TGAGCGTCTTGACGAAGATCTGCAT 2092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359957450753670