Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2468 98.7 1e-15 >seq2468 Length=4028 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 16178 TGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTG 16237 |||| |||| ||| |||| | ||| ||||| || | ||| |||||||| |||| Sbjct 3085 TGGTCAAGGTATTTGTACATCAAACATGCGAAATCTCGATGGAGTCCTTCATCTCGTGAA 3144 Query 16238 ATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATC 16297 || ||||| ||| ||| ||||| ||||| ||| || ||||| ||||| || || Sbjct 3145 ATTAGTTCATTGCTGTGAGTCAACCCAGGCATGAGTCCACGCTTCTTCAACCAAAAAATG 3204 Query 16298 GCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCG--TT 16355 |||||||| || || || || || || || || || | ||||||||||| | || || Sbjct 3205 GCAGCAAACGATCCGGAGAAAAAGATTCCTTCCACGGCAGCAAAAGCGATCACGCGAATT 3264 Query 16356 CCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTT 16407 | | ||| ||||| |||| | ||||||| | |||| |||||||| Sbjct 3265 C--CAAACGAAGCATTCTTATCTCCAATCCATCGGAGAGCCCAGTCGGCTTT 3314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511323291524640