Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_001317.1 Length=30624 Score E Sequences producing significant alignments: (Bits) Value seq4423 93.3 8e-15 >seq4423 Length=667 Score = 93.3 bits (102), Expect = 8e-15 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 2820 CCCTTGTTGAACAGCTCGCCAGACCAGAAGGGATAAGCGCCGTGCGCCAGCGTTGAGGGT 2879 ||||||||||| ||||||| | |||||||| || || |||| |||| | || || Sbjct 208 CCCTTGTTGAAGCGCTCGCCGGTCCAGAAGGTGTAGGCCTCGTGTGCCATGCTCGATGGC 149 Query 2880 GTCGAAAAGTAGGTTGAGCGCAGATGCTTCTGCGAGGCCATGCCCGAGGCGACTTTGCGC 2939 ||||| |||||||| ||| ||||||||| |||||||| |||||| ||| Sbjct 148 GTCGAGAAGTAGGTCCGGCGGTACTGCTTCTGCATCGCCATGCCGCTGGCGACCTTGTTG 89 Query 2940 AGCTTCTGAAAATTCGGGATCCAGAATATTTCATCGACATACAGGTCGCCGTTATGGCTC 2999 || | || || || | ||||||| | ||| |||| || | || ||||| || || | Sbjct 88 AGTTCCTTGAACTTGAAGGTCCAGAAGAATTCGTCGAAGTAGAAGTTGCCGTGATAGCCC 29 Query 3000 TGAGCCGTGTTGGAGTTGGTACCGAG 3025 || || || || |||||| || || Sbjct 28 TGGGCGGTCCGGGCGTTGGTCCCCAG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97858635356464