Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_001396.1 Length=7308 Score E Sequences producing significant alignments: (Bits) Value seq13980 123 1e-24 >seq13980 Length=1647 Score = 123 bits (136), Expect = 1e-24 Identities = 169/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 3704 GACCACGTTGCCAAGGTGTTCTATGACGGCTACGTGCCCGTGTTGTCCGAGCTAGGCCGG 3763 |||||||| || || ||| |||| | ||||||| |||| || | ||| || || || Sbjct 731 GACCACGTGGCAAAAGTGGTCTACGGCGGCTACCTGCCGGTCATAAGCGAACTGGGGCGC 672 Query 3764 ATTGCGTTTCCGCTCTTCGCACTGGTCATGGCCTACAACCTGGCACAGCCTGGAGCTGAT 3823 || ||||| ||||| || |||||||| ||||||| |||||| || ||||| || || || Sbjct 671 ATCGCGTTCCCGCTGTTTGCACTGGTAATGGCCTGCAACCTAGCCCAGCCGGGTGCAGAC 612 Query 3824 GTAGGCAAGTCGGTCCGCCGGCTGGTGTGCTGGGGGCTGTTGGCGCAACCGTTCCACGCC 3883 | |||||||| |||| || |||| ||||| || | ||||||||| | || || Sbjct 611 CTGCGCAAGTCGATCCGTCGCCTGGCCGTATGGGGCGTGGTCGCGCAACCGCTGCATGCA 552 Query 3884 TGGGCGTTTGGCTACTGGGTGCCCGTGAACGTCCTTCTGGCGTTCGCCCTGGCTGC 3939 || || || |||| |||| | ||| | || || | || ||||||||||| Sbjct 551 CTTGCCTTCGGTCCCTGGTTGCCACTCAACATACTGCTTACTTTTGCCCTGGCTGC 496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 23266668940416