Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq7750 93.3 4e-14 seq13049 89.7 4e-13 >seq7750 Length=8304 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || ||||| | ||| || | ||| | ||| ||||| ||||||||||| ||||| | Sbjct 2708 TTCCACCGCGCAGACGGAGAACAAGATGAAGAGTTGACTCTTTTTGAATGTTGTAGTCGG 2767 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || || || |||| || ||||| || || || | || | | ||| ||||| || Sbjct 2768 AGAGAGTACGGCCGTCTTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCTGGGG 2827 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||||||||| |||||| || || | ||| || ||| || || Sbjct 2828 GAATTCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTCTCGATTGTGTCAGAGGCTTCTA 2887 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | |||||||||||| || || | || || ||||| |||||||| Sbjct 2888 CCTCGAGGGTAATGGTCTTTCCAGTAAGAGTCTTCACAAAGATTTGCAT 2936 >seq13049 Length=11502 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | || |||||||| || ||||| || || | Sbjct 10308 CCACCACGAAGACGGAGAACGAGATGGAGTGTTGACTCCTTCTGGATGTTGTAATCAGAG 10249 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || || ||||| || || ||| | ||||| | |||||||| ||| Sbjct 10248 AGGGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGG 10189 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||| || ||| || | | | | ||||| || || | Sbjct 10188 ATTCCTTCCTTGTCCTGGATTTTGGCTTTGACGTTCTCAATACTATCAGAGGCTTCGACT 10129 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | |||||| |||||||| || | || |||||||| || ||||| Sbjct 10128 TCTAAGGTAATTGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 10082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422185855160432