Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_001901.1 Length=46375 Score E Sequences producing significant alignments: (Bits) Value seq10737 178 4e-40 >seq10737 Length=14001 Score = 178 bits (196), Expect = 4e-40 Identities = 581/897 (65%), Gaps = 23/897 (3%) Strand=Plus/Plus Query 15978 ACAGAGGTCATTGACGCCAAACTGCGTTATCCAAATACCGCGCTGCTGTACATCGAATTC 16037 || ||||| |||||||| |||||| |||| || | ||||| | ||| | | | || Sbjct 8495 ACCGAGGTGATTGACGCTAAACTGAGTTACCCCGAAACCGCCTTATTGTTCGTTCAGTTT 8554 Query 16038 GACTCAAGCCAGTTTAACGGCTCTATCCCGCAAATATCCTGCGAACCGCGAGGGCGTGTT 16097 || | | ||||| | || ||||||||| | ||||| ||||| | ||| || Sbjct 8555 GATGCCAAACAGTT---CCGCAATATCCCGCAGGTCTCCTGTGAACCCAAAATGCGCATT 8611 Query 16098 ATCCGCGTACCGGATACTTACGACCCAGAAACCCGCACTTATAACGGCACCTGGCTGGGG 16157 ||||| || ||||||| ||| || || || ||||| ||| || ||| ||| Sbjct 8612 ATCCGGGTGCCGGATAATTATGATCCGGACCGTCGCACCTATTCGGGGGTGTGGGCAGGG 8671 Query 16158 ACGTTTAAATGGGCATGGACTGATAATCCGGCCTGGATTTTTTACGATCTGGTGGTGAGT 16217 | ||||||||||| ||||| || |||||||| ||||| | || || ||| || | | | Sbjct 8672 GCCTTTAAATGGGCGTGGACAGACAATCCGGCGTGGATACTGTATGACCTGATGATCAAT 8731 Query 16218 GACCGCTTTGGCCTTGGCGACCGCCTGACGGCAGCAAAT------ATTGATAAATGGACG 16271 ||||| || || |||| ||| ||| || | ||| | | |||||| Sbjct 8732 GACCGGTTCAGCATTGGTACCCGGGTGAAAGCTGAGAATCTGGCGCTGGCAAAATGGGAC 8791 Query 16272 CTTTACCAGGTTGCACAATATTGCGATCAGCCGGTACCAGACGGAAAAGGCGGTTCCGGC 16331 || |||| |||| | | || || |||||||| || || || ||||| || Sbjct 8792 CTGTACCGCATTGCCCGGCACTGTGACCAGCCGGTGCCGGATGGCAAAGG------GGGG 8845 Query 16332 ACCGAGCCTCGCTATACCTGTAACGTGTATGTGCAGGAGAGGAATGACGCTTATACCGTT 16391 | ||||| | | ||||| || || ||| | ||| | | ||||| | || || Sbjct 8846 ATGGAGCCGAGACACACCTGCAATGTCTATATTCAGTCGCAAGAGGACGCCTGGACTGTC 8905 Query 16392 TTGCGTGATTTTGCGGCCATATTCCGTGGCATGACGTACTGGGGCGGCGATCAAATCGTT 16451 |||| ||| ||| | || ||| |||||||| | ||||| | || | || | Sbjct 8906 CTGCGGGATATTGTCGGTATCTTCAACGGCATGACCTTCTGGGCGAACAATAACATGAAT 8965 Query 16452 GCGCTGGCTGATATGCCCCGCGATGTGGATTACAGCTATACGCGCGCTAATGTGGTTGAC 16511 | |||||| |||||||||||| ||||||| | || || ||||| || ||| ||| Sbjct 8966 GTGCTGGCGGATATGCCCCGCACGGTGGATTTAAACTTCACCCGCGCCAACGTGCGGGAC 9025 Query 16512 GGCCGTTTTACCTATTCAGGCAGCACCACGAAAACCCGCTACACCACGGCACTGGTTTCC 16571 || ||||||||||| | || | |||||||| ||| ||||||| |||| | Sbjct 9026 GGTAAATTTACCTATTCCAGTGCCAGCGAGAAAACCCATTACTCCACGGCGATGGTGAGC 9085 Query 16572 TGGTCCGATCCGGGCAACGCCTATGCAGACGCGATGGAGCCTGTATTTGAACAGGAACTC 16631 ||||| |||||| |||| ||| || ||| |||| | || || || | | | Sbjct 9086 TGGTCAGATCCGCAGAACGGTTATCAGGATGCGGTGGAAGCGGTCTTCGACCCTCAGTTA 9145 Query 16632 GTGTCCCGCT-TTGGTTCAAACCAGCTCGAAATGACAGCTATTGGTTGTACCCGACAGTC 16690 || ||| | | | | ||| ||| || || || || ||||| || ||||| ||| Sbjct 9146 ATGCGCCGGTATCAGGTGAAA-CAGGCGGACATCACCGCAATTGGCTGCACCCGGCAGAG 9204 Query 16691 AGAGGCAAACCGTAAGGGGCGCTGGGGTATCCTG---ACCAATAATAAGGATCGCGTCGT 16747 ||||| | || | ||| ||||| ||| ||||| | | || || | || Sbjct 9205 TGAGGCCCAGCG-GCGCGGCAAGTGGGTA--CTGTATACCAACCAGTATGACCGGATGGT 9261 Query 16748 ATCGTTCAATGTCGGTCTGGACGGCAACATTCCACAGCCCGGTTATATTATTGCGGTTGC 16807 | || | || || ||||| ||| ||||| ||||||||||||||| | ||| || Sbjct 9262 CACCTTTACCGTGGGGCTGGAGGGCCGAATTCCGTTGCCCGGTTATATTATCGGGGTGGC 9321 Query 16808 CGATGAGCTGCTATCCGGGAAGGTGATGGGAGGGCGTATCAGAGCGGTTAATGGTCG 16864 ||||| | ||||| || |||| ||||||||||| |||| | |||| || Sbjct 9322 GGATGAAGCCTTCTCCGGTCGCGTACTGGGTGGGCGTATCAGCGCGGCTGATGGACG 9378 Score = 107 bits (118), Expect = 6e-19 Identities = 183/265 (69%), Gaps = 3/265 (1%) Strand=Plus/Plus Query 14080 TATTTCCCCTGCCGCAACCTCTCAGCCGAGCCGACAGAGCATTTTCACCTTTCTCCTGAA 14139 ||| ||| ||||||||| | | || || || ||||| ||| ||| ||| ||| Sbjct 6601 TATATCCGCTGCCGCAATGCCGCCCCCTCACCCACCGAGCAATTTTGCCTCCATCCCGAA 6660 Query 14140 GACTACGCAGCTGCCGAGGACTGGGGGACGGTGGTGGCCATTGTTCACAGCCACCCTGAC 14199 || ||||| ||||| || |||||| | || ||||| || ||||| ||||| ||| Sbjct 6661 GATTACGCTAAAGCCGAAGATGCGGGGACTATTGTTGCCATCGTCCACAGTCACCCGGAC 6720 Query 14200 GCCACGACACAGCCGAGCGAACTGGATAAAGCGCAATGTGATGCAACGCTGCTGCCCTGG 14259 |||||||||||||| ||| ||||||||| || |||||||| | | | || ||| Sbjct 6721 GCCACGACACAGCCCAGCCAACTGGATATCGCACAATGTGACCTGTCACAAATCCCGTGG 6780 Query 14260 CATATTGTGAGCTGGCCGGAGGGGGATTTACGCACTATTCAGCCGCGCGGGGAACT---G 14316 |||| ||||||||||| ||| | || || ||| |||| || || | | Sbjct 6781 GTCATTGCTTCATGGCCGGAGGGTGATATTCGAACCATTATGCCGACCGAGGGAGTTAAA 6840 Query 14317 CCGCTACTGGAGCGCCCGTTCGTGC 14341 || || ||| ||||||||||||| Sbjct 6841 CCACTGTTGGGCCGCCCGTTCGTGC 6865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148253304992888