Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq13049 165 8e-36 seq12388 134 1e-26 seq7750 131 2e-25 seq10049 129 6e-25 seq8226 113 5e-20 seq1186 91.5 2e-13 >seq13049 Length=11502 Score = 165 bits (182), Expect = 8e-36 Identities = 166/213 (78%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || ||||| || ||||| ||||| |||| ||||||||| Sbjct 7191 AACATGCAGATCTTCGTGAAGACCCTCACTGGTAAAACGATCACTCTCGAAGTCGAAGCC 7250 Query 40747 ACCGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||||| | | ||||| |||||| ||||| | |||||||||||||| || | || Sbjct 7251 TCAGACAGCATTGAAAACG-TCAAGGCCAAAATCCAGGACAAAGAGGGCATTCCTCCAGA 7309 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||||||||| || |||| || |||||||| || || || | ||||||||| || || Sbjct 7310 CCAGCAACGTCTTATCTTTGCTGGCAAACAACTTGAAGATGGCCGCACCCTCTCTGATTA 7369 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||||| | || || ||||| || Sbjct 7370 CAACATCCAGAAGGAGTCAACACTCCATCTCGT 7402 Score = 132 bits (146), Expect = 5e-26 Identities = 148/195 (76%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || ||||| || ||||| ||||| |||| ||||||||| Sbjct 9851 AACATGCAGATCTTCGTGAAGACCCTCACTGGTAAAACGATCACTCTCGAAGTCGAAGCC 9910 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||||| | | |||| |||| | ||||| | |||||||| || | ||| | || Sbjct 9911 TCAGACAGCATTGAGAACG-TCAAAGCTAAAATCCAGGACAAAGAAGGAACCCCTCCAGA 9969 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||||||||| || |||| || |||||||| || || |||| |||||| | |||||| Sbjct 9970 CCAGCAACGTCTTATCTTTGCTGGCAAACAACTTGAAGACGGCCGCACCTTGTCCGACTA 10029 Query 40866 CAACATCCAGAAGGA 40880 ||||||||| || || Sbjct 10030 CAACATCCAAAAAGA 10044 Score = 127 bits (140), Expect = 2e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || ||||| ||||| |||| ||||||||| | Sbjct 10310 ATGCAGATCTTCGTGAAGACCCTCACTGGTAAAACGATCACTCTCGAAGTCGAAGCCTCA 10369 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||||| | | |||| |||| | || |||| ||||||||||| ||||| | || || Sbjct 10370 GACAGCATTGAGAACG-TCAAAGCCAAGATTCAGGACAAAGAGGGAATCCCTCCCGATCA 10428 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||| | |||| ||| || ||||| || || || | |||||||| |||||||| Sbjct 10429 ACAGCGATTGATCTTCGCCGGAAAACAACTTGAGGATGGCCGCACCCTGTCTGACTACAA 10488 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||| || ||||| | || ||||| Sbjct 10489 CATACAAAAGGAATCGACTCTGCA 10512 Score = 123 bits (136), Expect = 3e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| || || ||| | || ||||||||| | Sbjct 10082 ATGCAGATCTTTGTCAAGACCCTTACTGGCAAGACAATTACCTTAGAAGTCGAAGCCTCT 10141 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || || | | |||| |||| | ||||| | ||||| || || |||||| | ||||| Sbjct 10142 GATAGTATTGAGAACG-TCAAAGCCAAAATCCAGGACAAGGAAGGAATCCCCCCAGACCA 10200 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || |||| || || || ||||| || || | ||||||||| || ||||| Sbjct 10201 GCAACGTCTTATCTTTGCTGGAAAGCAGCTTGAAGATGGCCGCACCCTCTCTGATTACAA 10260 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || ||||| || Sbjct 10261 CATCCAGAAGGAGTCAACACTCCATCTCGT 10290 >seq12388 Length=21549 Score = 134 bits (148), Expect = 1e-26 Identities = 159/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || ||||| || ||||| || ||||| |||||| | || ||||||||| Sbjct 15278 AACATGCAGATCTTTGTAAAGACCCTCACTGGTAAAACGATCACCCTAGAAGTCGAAGCC 15337 Query 40747 ACCGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | || || | | ||||| |||||| ||||| | ||||| || || || || | || Sbjct 15338 TCTGATAGTATTGAAAACG-TCAAGGCCAAAATCCAAGACAAGGAAGGAATTCCTCCAGA 15396 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||||||||| || |||| ||| || || ||||| || || | |||||||| ||||| Sbjct 15397 CCAGCAACGTCTTATCTTCGCCGGGAAGCAGCTTGAAGATGGCCGCACCCTATCTGACTA 15456 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| || ||||||||| | || || ||||| || Sbjct 15457 CAATATTCAGAAGGAGTCAACCCTCCATCTCGT 15489 >seq7750 Length=8304 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || ||||| || ||||||||||| | || |||||||| | Sbjct 994 AATGCAGATCTTCGTCAAGACACTCACCGGAAAAACCATCACTCTTGAGGTCGAAGCGTC 935 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||||| | ||| |||||| || || | |||||||| || || || | || || Sbjct 934 CGACACAATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGAATTCCTCCAGATCA 875 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| ||| || || ||||| || |||| || || ||| ||||||||| Sbjct 874 GCAACGCTTGATCTTCGCCGGAAAGCAGCTTGAAGACGGTCGTACTCTCTCCGACTACAA 815 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| | || || ||||| || Sbjct 814 CATTCAGAAGGAGTCGACCCTTCATCTCGT 785 Score = 122 bits (134), Expect = 9e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || ||||| || ||||||||||| | || |||||||| | Sbjct 1222 AATGCAGATCTTCGTCAAGACACTCACCGGAAAAACCATCACTCTTGAGGTCGAAGCGTC 1163 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||||| | ||| |||||| || || | || || || || || || | || || Sbjct 1162 CGACACAATCGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCAGATCA 1103 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| ||| || || ||||| || || | |||||| || |||||||| Sbjct 1102 GCAACGGTTGATCTTCGCCGGAAAGCAGCTCGAAGATGGGCGCACTCTTTCTGACTACAA 1043 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || ||||| || Sbjct 1042 CATCCAGAAGGAGTCGACCCTTCATCTCGT 1013 Score = 102 bits (112), Expect = 8e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || || || ||||| ||| |||| || |||||| | Sbjct 2936 ATGCAAATCTTTGTGAAGACTCTTACTGGAAAGACCATTACCCTCGAGGTAGAAGCCTCT 2877 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | ||||| || || || ||| | ||||| Sbjct 2876 GACACAATCGAGAACGTT-AAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCA 2818 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || | |||| ||| || || ||||| || |||| || || ||| ||||||||| Sbjct 2817 ACAGCGTTTGATCTTCGCCGGAAAGCAGCTTGAAGACGGCCGTACTCTCTCCGACTACAA 2758 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| || || ||| | || || ||||| || Sbjct 2757 CATTCAAAAAGAGTCAACTCTTCATCTTGT 2728 >seq10049 Length=10599 Score = 129 bits (142), Expect = 6e-25 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || ||||| || ||||||||||| |||| ||||||||| Sbjct 9401 AACATGCAGATCTTCGTGAAGACCCTCACTGGTAAAACCATCACTCTCGAAGTCGAAGCC 9342 Query 40747 ACCGACAGC-GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | || ||| || |||| |||||| || || | ||||| || || ||||| | || Sbjct 9341 TCTGATAGCATTGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCGCCAGA 9283 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| ||| | |||| ||| || || ||||| || |||| || || || |||||| Sbjct 9282 CCAGCAGCGATTGATCTTCGCCGGAAAGCAGCTTGAAGACGGTCGTACTCTTTCCGACTA 9223 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| || ||||||||| | || || || || || Sbjct 9222 CAATATTCAGAAGGAGTCAACCCTCCACCTCGT 9190 >seq8226 Length=1064 Score = 113 bits (124), Expect = 5e-20 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || ||||| || || ||| | || ||||||||| | Sbjct 784 ATGCAAATTTTTGTCAAGACCCTTACTGGCAAGACAATTACCTTAGAAGTCGAAGCCTCA 725 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||||| | ||| |||||| || |||| ||||| || || ||||| | |||||| Sbjct 724 GACAGCATTGAAAATGTCAAGGCCAAGATTCAAGACAAGGAAGGTATCCCTCCAGACCAG 665 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||| | |||| ||| || ||||| || || |||| |||||| | |||||||||| Sbjct 664 CAGCGATTGATCTTCGCTGGAAAACAACTTGAGGACGGCCGCACCTTGTCCGACTACAAC 605 >seq1186 Length=9182 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| |||||||| ||||| ||||||||||| || || || |||| ||||| || || Sbjct 3325 ATGCAGATATTCGTCAAAACTCTCACGGGCAAGACAATTACGCTCGAAGTCGAGGCGTCC 3266 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | |||| ||||| | ||||| |||||||| || | || || Sbjct 3265 GACACCATCGAAAATGTGAAGGCCAAAATCCAGGACAAGGAGGGCATTCCGCCTGATCAA 3206 Query 40810 CAACGACTCATCTACGCGGGCAA 40832 ||||| || |||| ||| || || Sbjct 3205 CAACGTCTTATCTTCGCTGGTAA 3183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515127413699520