Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq2527 134 1e-26 >seq2527 Length=10055 Score = 134 bits (148), Expect = 1e-26 Identities = 296/440 (67%), Gaps = 4/440 (1%) Strand=Plus/Minus Query 16234 ACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAG 16293 ||| |||||||| | ||| | |||||| || || ||||||||||| ||| | Sbjct 5567 ACACGCAAAATCTCGATGGAGTCCTTCATCTCTTGAAATTAACTCGTTACTGTGTGTCAA 5508 Query 16294 ACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAA 16353 ||| ||||| ||||| ||||| || | |||||| || || ||||| || ||||| || || Sbjct 5507 ACCCGGCATAAGTCCACGTTTCTTCAGCCAAAAAATTGCAGCAAACGAGCCAGAGAAAAA 5448 Query 16354 TATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttc 16413 || ||||| ||||| ||||||||||| | ||| || | | ||| ||| |||| Sbjct 5447 GATTCCTTCCACTGCAGCAAATGCAACAACACGCATCCCAAATGAAGCATTCTTATTTTC 5388 Query 16414 tatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATT 16473 ||||||| | | ||||| |||||| | ||| | | | | || | ||||| || Sbjct 5387 AATCCATTGAATTGTCCAATCTGCTTTCTTTTTTATATACGGAAAGTCGTGAATTGCGTT 5328 Query 16474 AAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACAT 16533 || | ||||| ||| ||| ||| || || || || | | |||||| Sbjct 5327 GAAGAGTGTATTTTGTTCGACTGGATCGTTAATGTACGTTTCGATCAATTTCGAATACAT 5268 Query 16534 TTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATAT 16593 ||| || ||||| |||| ||| ||||||||| || || | || || | || Sbjct 5267 TTCAGAGTGAATTCCTTCCACTGCAATCTGAAAATTGTAGAAAGAGAGTGCCTCAGGCAT 5208 Query 16594 TTGTACTTC-AGAGTAAAACCTTTCTGCTAAG-TTTTCGTTAACTATTCCATCGCTAGCT 16651 | ||||| | ||||||| || | || ||||| || || |||||||| |||| Sbjct 5207 CTTCACTTCTTGTGTAAAAC--GTCCAATGAGATTTTCATTTACGATTCCATCTGAAGCT 5150 Query 16652 GCAAAAAACGCAAGTATGTG 16671 |||||||| ||||| ||||| Sbjct 5149 GCAAAAAATGCAAGAATGTG 5130 Score = 91.5 bits (100), Expect = 1e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 15946 TTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTC 16005 ||||||||| ||||| ||| ||||||||||||||||| ||||| | |||||| ||||| Sbjct 5895 TTGATATTCGGAAACTCGCTTCTCAAAGAAATTTGTTTTGCCTTCGATTGAAATGTTTTC 5836 Query 16006 CATAAAATCAAAAGGATT 16023 |||||| ||||| ||||| Sbjct 5835 CATAAAGTCAAACGGATT 5818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462429603487200