Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq2527 107 2e-18 >seq2527 Length=10055 Score = 107 bits (118), Expect = 2e-18 Identities = 295/449 (66%), Gaps = 20/449 (4%) Strand=Plus/Minus Query 14201 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 14260 |||||||||||||| | ||| || || |||||||| ||| | ||||| ||| Sbjct 5569 AAACACGCAAAATCTCGATGGAGTCCTTCATCTCTTGAAATTAACTCGTTACTGTGTGTC 5510 Query 14261 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 14320 || || ||||| | ||| ||||| || | |||||| |||||||| || || || || || Sbjct 5509 AAACCCGGCATAAGTCCACGTTTCTTCAGCCAAAAAATTGCAGCAAACGAGCCAGAGAAA 5450 Query 14321 AATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTC 14380 || ||||| || ||||||||||| || | | || ||||| || || || || || Sbjct 5449 AAGATTCCTTCCACTGCAGCAAATGCAACAACACGCATCCCAAATGAAGCATTCTTATTT 5390 Query 14381 GATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCA 14440 ||||||| | | ||| || | ||| ||||| ||| | | | ||| || Sbjct 5389 TCAATCCATTGAATTGTCCAATCTGCTTTCTTTTTTATATACGGAAAGTCGTGAATTGCG 5330 Query 14441 TTAAATAAATGTTCCTTCTCTTTAGTACTTGA-----AATGTATGTATCAATAAGTAAGC 14495 || || | || || | || ||| || |||||| || || || | | Sbjct 5329 TTGAAGA---GTGTATTTTGTT--CGACTGGATCGTTAATGTACGTTTCGATCAATTTCG 5275 Query 14496 TATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTT 14555 ||||||||||||||| || ||||| || ||||||||| || ||| | || | Sbjct 5274 AATACATTTCAGAGTGAATTCCTTCCACTGCAATCTGAAAATTGTAGAAAGAGAGTGCCT 5215 Query 14556 CTGACCATTGTACCTC-TGAGTAAAATCTTTCGGCCAA----ATTTTCATTAACTATACC 14610 | | | | || || || |||||| || |||| ||||||||| || || || Sbjct 5214 CAGGCATCTTCACTTCTTGTGTAAAA-----CGTCCAATGAGATTTTCATTTACGATTCC 5160 Query 14611 ATCACTAGCTGCAAAAAATGCCAATATGT 14639 ||| ||||||||||||||| | |||| Sbjct 5159 ATCTGAAGCTGCAAAAAATGCAAGAATGT 5131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482259670131360