Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq13049 91.5 1e-13 >seq13049 Length=11502 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 24828 CATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATC 24887 || ||||||||| || || || ||| | || || |||||||| || |||| |||||| | Sbjct 7190 CAACATGCAGATCTTCGTGAAGACCCTCACTGGTAAAACGATCACTCTCGAAGTCGAAGC 7249 Query 24888 GAGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGA 24947 ||||| | |||| || |||| ||||| | ||||| ||| | || || Sbjct 7250 CTCAGACAGCATTGAAAACGTCAAGGCCAAAATCCAGGACAAAGAGGGCATTCCTCCAGA 7309 Query 24948 CCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTA 25007 |||||||||| | || | ||| ||||||||||| |||||| | || | ||||| Sbjct 7310 CCAGCAACGTCTTATCTTTGCTGGCAAACAACTTGAAGATGGCCGCACCCTCTCTGATTA 7369 Query 25008 CAGCATACAGAAAGAGGCCACGCTTCAT 25035 || ||| ||||| ||| | || || ||| Sbjct 7370 CAACATCCAGAAGGAGTCAACACTCCAT 7397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418231342163840