Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_003356.1 Length=42575 Score E Sequences producing significant alignments: (Bits) Value seq9889 118 3e-22 seq12872 102 2e-17 >seq9889 Length=1737 Score = 118 bits (130), Expect = 3e-22 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 23290 GTATTCAAAACGAAACATCTGAATATCTGGGTGGCAGCAAAAGACGCCTTCTTCAATCTT 23349 || || ||||| || || |||||||||||||| | || ||| || | ||||||| | Sbjct 17 GTCTTTAAAACCAAGCACCTGAATATCTGGGTCTCCGCCCGAGAGGCGTACTTCAATATG 76 Query 23350 GTGAACTGGCAGAAATGTGAAGACAGGAGTCTGACGCTGGAGCGTTTTGAGGGGCATACC 23409 |||| |||| | | || ||||||| | ||||| ||||| | || ||||| || || Sbjct 77 GTGAGCTGGAAACAGTGCGAAGACACGTCGCTGACACTGGAACAGTTCGAGGGACAACCC 136 Query 23410 TGCATCCTGGCGTTTGACCTTGCGCGAAAGCTGGATTTGAACGCGATGGTACGGCTTTTT 23469 || |||||||||||||| || || |||||||| ||||| |||| ||||||||| Sbjct 137 TGTTATCTGGCGTTTGACCTGGCCCGTAAGCTGGACATGAACAGCATGGCCCGGCTTTTT 196 Query 23470 ACCCGAGA 23477 ||||| || Sbjct 197 ACCCGTGA 204 >seq12872 Length=1234 Score = 102 bits (112), Expect = 2e-17 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 30587 GGCAAATGATGGTACCCGTTTTGGTCCTGGGCAGGCGATTGTTACTCCTGCCGTTATCAA 30646 ||| || || |||||| | || || | || |||||| || || || || ||| Sbjct 1042 GGCCAACGACGGTACCAGCTTCGGCGCCGGCGCGGCGATCGTCACGCCGATTGTGATCCG 983 Query 30647 AGGGGAGCTTCTGGCGACATATCGTCAGATGGAGCGTGCCGGTATTGTGGAAAATTACGA 30706 || ||||| | ||| | ||| | || | ||||| ||||| ||||| || || ||| Sbjct 982 GGGCGAGCTGATCGCGGCGTATGGCGAGCTTGAGCGCGCCGGCATTGTCGAGAACATCGA 923 Query 30707 TCTGTTTAAACAGTATCTGATAGTTGAGCGTGATGCGGATAACCCGAACCGACTGAACAC 30766 ||| ||| || | ||||| || |||||||| ||| ||||||||||| |||||| Sbjct 922 GGCGTTCAAAGAGCACCTGATTGTCGAGCGTGACGCGAGCAACCCGAACCGCCTGAACGT 863 Query 30767 GCTGTTCCCGCCGGATTATGTTAACCAGTTACGTGTCTTTGCGGTG 30812 |||||| ||||| || ||||||||||| || || || ||| || Sbjct 862 GCTGTTTCCGCCTGACCTGGTTAACCAGTTGCGCGTGTTCGCGCTG 817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136095362981688