Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq2527 107 2e-18 >seq2527 Length=10055 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 13657 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13716 |||||||||||||| | ||| || || |||||||| ||| | ||||| ||| Sbjct 5569 AAACACGCAAAATCTCGATGGAGTCCTTCATCTCTTGAAATTAACTCGTTACTGTGTGTC 5510 Query 13717 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 13776 || || ||||| | ||| ||||| || | |||||| |||||||| || || || || || Sbjct 5509 AAACCCGGCATAAGTCCACGTTTCTTCAGCCAAAAAATTGCAGCAAACGAGCCAGAGAAA 5450 Query 13777 AATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTT 13836 || ||||| || ||||||||||| || | | || ||||| || || || || ||| Sbjct 5449 AAGATTCCTTCCACTGCAGCAAATGCAACAACACGCATCCCAAATGAAGCATTCTTATTT 5390 Query 13837 GATATCCATTTTCTAGCCCATTCAGAtttttttttAATA 13875 ||||||| | | ||| || | ||| ||||| ||| Sbjct 5389 TCAATCCATTGAATTGTCCAATCTGCTTTCTTTTTTATA 5351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478503539405280