Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2527 127 3e-24 >seq2527 Length=10055 Score = 127 bits (140), Expect = 3e-24 Identities = 314/470 (67%), Gaps = 10/470 (2%) Strand=Plus/Plus Query 125108 TTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGA 125167 ||||| || || ||||| | || ||||| |||||| | || || ||||| | || || Sbjct 5099 TTTGAATGCAAACGAGCGTTATTTCATATCTCACATTCTTGCATTTTTTGCAGCTTCAGA 5158 Query 125168 TGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGT 125227 ||||||||| || || ||||| | ||| || | ||||| ||| || || |||| Sbjct 5159 TGGAATCGTAAATGAAAATCTCATTGGACGTTTTACACAAGAAGTGAAGATGCCTGAGGC 5218 Query 125228 GTCGTGCTTTTACGGATTCCAAATCATG-ATTGAGAACG--TGCACTCGGAAATGTACTC 125284 | || ||| || || || || | || ||| | | ||||| |||||||| || Sbjct 5219 ACTCTCTTTCTACAATTTTCAGAT--TGCAGTG-GAAGGAATTCACTCTGAAATGTATTC 5275 Query 125285 TACACTGATTGACATGTACATTCGCGATCCG--CAACGTAAACACATGCTCTTTAACGCA 125342 | | |||| || | ||||||| |||||| | | ||| ||| ||||| |||||| Sbjct 5276 GAAATTGATCGAAACGTACATTAACGATCCAGTCGAACAAAATACA--CTCTTCAACGCA 5333 Query 125343 ATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGAC 125402 || || | |||| |||| || || || | ||| |||| ||||| || | Sbjct 5334 ATTCACGACTTTCCGTATATAAAAAAGAAAGCAGATTGGACAATTCAATGGATTGAAAAT 5393 Query 125403 GACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTT 125462 | || |||| | | | | || ||||| || || || || || ||||| || Sbjct 5394 AAGAATGCTTCATTTGGGATGCGTGTTGTTGCATTTGCTGCAGTGGAAGGAATCTTTTTC 5453 Query 125463 TCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACG 125522 || || ||||| || || |||||||| ||||| || ||||| ||||| || |||| Sbjct 5454 TCTGGCTCGTTTGCTGCAATTTTTTGGCTGAAGAAACGTGGACTTATGCCGGGTTTGACA 5513 Query 125523 CACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 |||||||||||||| || || |||| || || || || | || ||||| Sbjct 5514 CACAGTAACGAGTTAATTTCAAGAGATGAAGGACTCCATCGAGATTTTGC 5563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740927180303520