Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_004348.1 Length=40679 Score E Sequences producing significant alignments: (Bits) Value seq2795 223 9e-54 >seq2795 Length=11366 Score = 223 bits (246), Expect = 9e-54 Identities = 416/598 (70%), Gaps = 16/598 (3%) Strand=Plus/Minus Query 19418 AATGGCTAATCTACGCAAAGAAGCGCGCGGCAGAGAATGCCAGGTACGTATTTATGGCGT 19477 |||||| |||||||||||||||||||| || ||||||| ||||| | || ||| | Sbjct 3919 AATGGCAAATCTACGCAAAGAAGCGCGGGGTCGAGAATGTCAGGTCAGAATACCGGGCAT 3860 Query 19478 ATGTAATGGCAATCCTGAAACTACAGTTCTGGCACATTACCGGATGGCTGGAATTTGCGG 19537 ||||| || || ||||| ||||||||| ||||||||||||||||| ||||| || Sbjct 3859 CTGTAACGGTAACAGCGAAACGGTAGTTCTGGCTCATTACCGGATGGCTGGCATTTGTGG 3800 Query 19538 AACGGGGATGAAGCCTGACGACCTGATAGGTGCATGGGCTTGTAGCGCGT-GTCACGATG 19596 | ||||||||| || | || ||| | || |||||||| ||| || || ||||||||| Sbjct 3799 CATGGGGATGAAACCCAATGATCTGTTTGGGGCATGGGCGTGTT-CGTGTTGTCACGATG 3741 Query 19597 AAATCGATCGACGAACCCATATTCTCGACA-ACAAAGAC--GCCAGACTTTAC-CACCTC 19652 |||| || || |||| | || |||| | | ||| || || | | ||| | Sbjct 3740 AAATAGACCGCAGAAC---GAGGCT-GACAGAGACCGACTATGCACACATGGCTCACTTA 3685 Query 19653 GAAGGCGTGATCAGGACGCAGGCGATACTGCTGAAGGAGGGGAAGATTAAGGCATGAAAA 19712 || || || ||||||||||| | ||| |||| |||||| |||||| | | |||||| Sbjct 3684 GAGGGTGTAATCAGGACGCAATCAATATTGCTATCGGAGGGTAAGATT-TGACGTGAAAA 3626 Query 19713 CATACCGAATAAAATTGCCGTGGCCTCCTTCAAACAACCGATATTGGCGACACTCAAGAG 19772 | ||| ||||||||||||||||||| || || | |||||| |||||||||| Sbjct 3625 CCTACAATTTAAAATTGCCGTGGCCTCCGACAGTTAATCACTATTGGAAACACTCAAGAT 3566 Query 19773 GGGTCCACTAC--ATCAGCGATTGGGGAAAGCGATACCGGCGAGAAGTAATCGAAATAAT 19830 ||| |||||| ||||| || || | | ||||| | || | | | | || || Sbjct 3565 GGG-GCACTACATATCAGAGAAAGGCATTAAC--TACCGACAGCAAATCAGCAACATCAT 3509 Query 19831 TCAGCAACAACAGCTAGACCTTAAAATCACACCCCGCATCAGAATCACCATTCTCGCAGC 19890 |||||| ||| | || | || | | | ||||||||| ||||| || | || Sbjct 3508 TCAGCAGCAAAACCTCAGTATCAATACCCAATCCCGCATCAAAATCAAAATAGTTGCCAA 3449 Query 19891 ACCTCCCGATAACCGCAAACGCGACCTGGACAATCTACCAAAAGCCGTTTTTGACGCACT 19950 || || || | || | | ||||| || || || || ||||| ||||| ||| | || Sbjct 3448 TCCCCCAGACAGACGACAGAGAGACCTCGATAACCTGCCTAAAGCGGTTTTCGACTCGCT 3389 Query 19951 CACTAGTGCGGGCTTCTGGCTGGATGACGGCCAGATAGACGATATGCGCATCAAGCGC 20008 ||| ||| || |||||| |||||| ||| | || ||||| ||||||| ||| Sbjct 3388 GACTCATGCTGGATTCTGGGCTGATGACAATCAGGTTGATTATATGAGCATCAAACGC 3331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130029189809784