Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_005284.1 Length=54865 Score E Sequences producing significant alignments: (Bits) Value seq9889 89.7 2e-13 >seq9889 Length=1737 Score = 89.7 bits (98), Expect = 2e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 2053 GGCAACCCGATCATGACGTGGTGTGTCAGCAACGTCATCGGCAAGAACCTGCCGGGAAAT 2112 ||||||||||| ||| | |||||| | ||||||| | || || | ||| || ||| Sbjct 676 GGCAACCCGATTATGGCCTGGTGTATTGGCAACGTGGTGGGGAAAACGCTGGGCGGGAAT 735 Query 2113 GACGATGTGGTGCGCCCGATCAAGCAGGGCAACGACAACAAGATTGACGGTGCTGTCGCA 2172 || || | ||||| || |||||| || || |||| ||| |||||||| || || || Sbjct 736 GATGACATTGTGCGGCCCATCAAGGAGCAGAAGGACAGCAAAATTGACGGCGCGGTGGCC 795 Query 2173 CTAATCATGGCGATAGGCCGCGCCATGCT 2201 || || |||||||| || ||||| || || Sbjct 796 CTGATAATGGCGATGGGGCGCGCTATCCT 824 Score = 87.8 bits (96), Expect = 6e-13 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 1504 TTCAAGACGAAGCACTTGAACGTCTGGACGTCGGCCAAGGCGGGCTATTTCAACCTCGAA 1563 || || || |||||| |||| ||||| || ||| | || || ||||| | | Sbjct 20 TTTAAAACCAAGCACCTGAATATCTGGGTCTCCGCCCGAGAGGCGTACTTCAATATGGTG 79 Query 1564 GACTGGAAATCATGCGAAGACCGATCGCTGACCCTTGAGCAGTTCGAGGGGCAAGATTGC 1623 ||||||| ||||||||| |||||||| || || ||||||||||| ||| || Sbjct 80 AGCTGGAAACAGTGCGAAGACACGTCGCTGACACTGGAACAGTTCGAGGGACAACCCTGT 139 Query 1624 GTGCTCGCGCTCGACATGGCGCGCAAGCTCGATTTGAACAGTATGGCCCGGCTTTT 1679 || ||| | ||| |||| || ||||| || ||||||| |||||||||||||| Sbjct 140 TATCTGGCGTTTGACCTGGCCCGTAAGCTGGACATGAACAGCATGGCCCGGCTTTT 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175416707012648