Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq10049 87.8 2e-12 >seq10049 Length=10599 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGT 48593 |||||| ||||| ||||| || | || || || |||| || |||||||| ||| || Sbjct 9207 CTCCTTCTGAATATTGTAGTCGGA-AAGAGTACGACCGTCTTCAAGCTGCTTTCCGGCGA 9265 Query 48594 AAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAG 48653 | || || |||||||| || ||| | | |||||||||| || || ||||| Sbjct 9266 AGATCAATCGCTGCTGGTCTGGCGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGT 9325 Query 48654 ACGCTATGGTATCGGTAGACTCCGTCT-CGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712 | | ||| |||| | || || || || ||| || ||||||||||| ||||| || ||| Sbjct 9326 TCTCAATGCTATCAG-AGGCTTCGACTTCGAGAGTGATGGTTTTACCAGTGAGGGTCTTC 9384 Query 48713 ACAAAAATCTGCAT 48726 || || |||||||| Sbjct 9385 ACGAAGATCTGCAT 9398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421178030246252