Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_005841.1 Length=41391 Score E Sequences producing significant alignments: (Bits) Value seq6313 129 2e-25 >seq6313 Length=4174 Score = 129 bits (142), Expect = 2e-25 Identities = 225/325 (69%), Gaps = 2/325 (1%) Strand=Plus/Plus Query 22616 ATGAAGTACCCAACAGTTATGGTCAATGGTGTGTCCGTTCGTGTTGATGAGGACGGACGC 22675 ||||| || |||||||| || || ||||| || || |||||||| ||| | | || | Sbjct 3713 ATGAAATATCCAACAGTAATTGTTAATGGAGTATCTGTTCGTGTGGATAATGCAGGCAGA 3772 Query 22676 TACAACTTAAACGATCTCCATGCAGCAGCAGTTGCAAATGGAGAGGCTACAGAGCAACAG 22735 || | | ||||||| || || || || ||||| ||| || || || |||||| |||| Sbjct 3773 TATAGCCTAAACGACCTACACGCCGCCGCAGTATTAAAAGGCGAAGCGACAGAGTCACAG 3832 Query 22736 CGCCCAAGCAAGTTTTTGTGTAGCGCG-CAGATAAAACGCTTCATAAAAGCACTAGAGGC 22794 || || | ||| ||| | ||| || ||| |||| | || | ||| | || | Sbjct 3833 CGACCCAACAAATTTATTCGTAATGCATCAGTAAAAAAGTTTGTTTCC-GCATTGGACTC 3891 Query 22795 CAAAGTGCAAAAAAGCACTTTGAAACAAATTCAACCACTTAAAATCATTAAAGGTGGTAC 22854 || | |||||||| | ||||| ||| |||| ||||||| | |||| || || | Sbjct 3892 CAGAAGACAAAAAAGTCGTCTGAAAGAAAATCAATCACTTAAGGTTGTTAATGGGGGCGC 3951 Query 22855 CGAACCTGGTGTGTGGGGCGTTGAACTACTGGCAATCAGATATGCAGCATGGATTAAGCC 22914 || | || || ||||| | || || |||| || | |||||||| ||||||||||| Sbjct 3952 TGACCAAGGCGTATGGGGTGCAGAGCTTTTGGCTATTCGCTATGCAGCCTGGATTAAGCC 4011 Query 22915 GGAATTTGAAATCGAGGTTTATGAA 22939 || |||||||| ||||||||| Sbjct 4012 TGAGTTTGAAATTAGTGTTTATGAA 4036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132307204207672