Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq10049 129 6e-25 seq13049 125 7e-24 seq7750 125 7e-24 seq12388 111 1e-19 seq11914 89.7 5e-13 seq8226 89.7 5e-13 seq6327 84.2 2e-11 >seq10049 Length=10599 Score = 129 bits (142), Expect = 6e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | || | ||| |||||||| ||||| ||||| ||| Sbjct 9171 GCCACCACGAAGACGGAGAACGAGGTGGAGGGTTGACTCCTTCTGAATATTGTAGTCGGA 9230 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || ||| || |||||||| || ||| |||| || ||||||||||| || || Sbjct 9231 AAGAGTACGACCGTCTTCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGCGG 9290 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||| ||||| ||| || ||||| | ||| | |||| | || |||| Sbjct 9291 GATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGCTATCAGAGGCTTCGAC 9350 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | ||||||||| || || || || ||||| ||||||||| Sbjct 9351 TTCGAGAGTGATGGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCATG 9399 >seq13049 Length=11502 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || || || | ||||| || ||||| |||||||| ||| Sbjct 10081 GCCACCACGGAGACGGAGGACCAAGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCGGA 10022 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||| || || || ||||| || |||| | ||| |||||||| ||||| Sbjct 10021 CAAGGTGCGGCCGTCTTCAAGTTGTTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGAGG 9962 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 | ||||||||||||| |||||| |||| | ||| | | || | || |||| Sbjct 9961 GGTTCCTTCTTTGTCCTGGATTTTAGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGAC 9902 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | |||||||| || || || || ||||| ||||||||| Sbjct 9901 TTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCATG 9853 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | ||| | || |||||||| || ||||||||||| Sbjct 10309 GCCACCACGAAGACGGAGAACGAGATGGAGTGTTGACTCCTTCTGGATGTTGTAATCAGA 10250 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| || || |||||||| || || |||| | ||| |||||||| || || Sbjct 10249 GAGGGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAGATAAGACGTTGCTGGTCTGGGGG 10190 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||| ||||| |||||| |||| | ||| | | |||| | || |||| Sbjct 10189 GATTCCTTCCTTGTCCTGGATTTTGGCTTTGACGTTCTCAATACTATCAGAGGCTTCGAC 10130 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||||| || || || || || || || || || ||||||||| Sbjct 10129 TTCTAAGGTAATTGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCATG 10081 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || || || | ||||| |||||||| |||||||| || Sbjct 10537 GCCACCACGGAGACGGAGGACCAAGTGCAGAGTCGATTCCTTTTGTATGTTGTAGTCAGA 10478 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||||| || || || || ||| |||| || ||||| || || ||||| Sbjct 10477 CAGGGTGCGGCCATCCTCAAGTTGTTTTCCGGCGAAGATCAATCGCTGTTGATCGGGAGG 10418 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||||| |||||||| ||| | | || |||| | ||| | | || | || |||| Sbjct 10417 GATTCCCTCTTTGTC-CTGAATCTTGGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGA 10359 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | |||||||| || || || || ||||| ||||||||| Sbjct 10358 CTTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCATG 10309 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | || |||||||| || ||||||||||| Sbjct 7420 CCACCACGAAGACGGAGAACGAGATGGAGTGTTGACTCCTTCTGGATGTTGTAATCAGAG 7361 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || || || ||||| || |||| | ||| |||||||| ||||| Sbjct 7360 AGGGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGAGGA 7301 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| |||||| ||||| | || | | || | || |||| Sbjct 7300 ATGCCCTCTTTGTCCTGGATTTTGGCCTTGACGTTTTCAATGCTGTCTGAGGCTTCGACT 7241 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | |||||||| || || || || ||||| ||||||||| Sbjct 7240 TCGAGAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCATG 7193 >seq7750 Length=8304 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | |||||||||||| ||||||||||| ||| Sbjct 767 CCACCACGAAGACGAAGAACGAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAG 826 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || |||||||| || ||| |||| || || ||||| || ||||| Sbjct 827 AGAGTACGACCGTCTTCAAGCTGCTTTCCGGCGAAGATCAAGCGTTGCTGATCTGGAGGA 886 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||||||||| ||| || ||||| | || | || |||| | |||| Sbjct 887 ATTCCTTCTTTGTCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCGGACGCTTCGACC 946 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | |||||| ||||| || || || ||||| |||||||| Sbjct 947 TCAAGAGTGATGGTTTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 993 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||| || || | ||| | || ||||| |||||||||||||| ||| Sbjct 2710 CCACCGCGCAGACGGAGAACAAGATGAAGAGTTGACTCTTTTTGAATGTTGTAGTCGGAG 2769 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || |||||||| || ||| |||| |||||||| ||||| || || Sbjct 2770 AGAGTACGGCCGTCTTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCTGGGGGA 2829 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| || ||| | | ||| | || || | || || | Sbjct 2830 ATTCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTCTCGATTGTGTCAGAGGCTTCTACC 2889 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||||| ||| || || || ||||| || || || || ||||| Sbjct 2890 TCGAGGGTAATGGTCTTTCCAGTAAGAGTCTTCACAAAGATTTGCAT 2936 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | |||||| || ||||| | ||| |||||||| ||||||||||||||| Sbjct 1497 CCTCCACGGAGACGCAGAACCAAATGCAAGGTGGACTCCTTCTGAATGTTGTAATCGGAG 1556 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| || ||||| || ||| |||| || |||||||| || || || Sbjct 1557 AGTGTACGACCGTCCTCGAGTTGCTTTCCGGCGAAGATCAAGCGCTGCTGATCTGGCGGA 1616 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| || || ||| || ||||| | ||| | ||| |||| | || | Sbjct 1617 ATTCCTTCCTTATCCTGGATCTTGGCCTTGACGTTCTCGATAGTGTCGGATGCTTCAACT 1676 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| || || || ||||| |||||||| Sbjct 1677 TCCAGAGTGATTGTCTTTCCGGTGAGGGTCTTAACGAAGATCTGCAT 1723 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| || || || | ||| | |||||||||||| || |||||||| || Sbjct 995 CCTCCACGCAGCCGGAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 1054 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || |||||||| || ||| |||| || || ||||| || ||||| Sbjct 1055 AGAGTGCGCCCATCTTCGAGCTGCTTTCCGGCGAAGATCAACCGTTGCTGATCTGGAGGA 1114 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| || || ||| || ||||| | || | || |||| | |||| Sbjct 1115 ATTCCTTCCTTATCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCGGACGCTTCGACC 1174 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | |||||| ||||| || || || ||||| |||||||| Sbjct 1175 TCAAGAGTGATGGTTTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 1221 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 131091 CTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTT 131150 ||| || ||| |||| || ||||| ||||| || || |||||||| ||||| |||||| Sbjct 1352 CTTACCGGCGAAGATCAAGCGCTGTTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATTTT 1411 Query 131151 CTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 ||||| | || | || || | | |||| || | ||||| ||| || ||||| Sbjct 1412 GGCCTTGACATTTTCGATTGTGTCAGACGCTTCGACCTCAAGGGTAATGGTCTTTCCGGT 1471 Query 131211 TAGAGTTTTTACGAAAATCTGCAT 131234 | |||||||||||| |||||||| Sbjct 1472 CAAAGTTTTTACGAAGATCTGCAT 1495 >seq12388 Length=21549 Score = 111 bits (122), Expect = 1e-19 Identities = 160/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 131010 ACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCAT 131069 ||| || | ||| || || || || | ||||| ||||| ||||| |||||||| || Sbjct 16014 ACCACGGAGACGGAGAACCAAGTGAAGAGTCGATTCCTTCTGAATATTGTAATCAGACAG 15955 Query 131070 GGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 |||||| || || |||||||| || ||| |||| | |||||| || || |||||||| Sbjct 15954 GGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGGAT 15895 Query 131130 TCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTC 131189 ||| || ||||| |||||| |||| | ||| | | || | || |||| || Sbjct 15894 TCCCTCCTTGTCCTGGATTTTGGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTC 15835 Query 131190 GACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || ||| | |||||||| || | || || || ||||| |||||| Sbjct 15834 GAGGGTGATCGTTTTACCAGTCAACGTCTTGACAAAAATTTGCATG 15789 >seq11914 Length=36757 Score = 89.7 bits (98), Expect = 5e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 131091 CTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTT 131150 ||| || ||| |||| | ||||||||||| |||||||||||||| ||||| ||| || Sbjct 2906 CTTACCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATTCCTTCCTTGTCCTGGATCTT 2965 Query 131151 CTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 ||| | | ||| | || || | | ||||| |||| ||| | || ||||| || Sbjct 2966 GGCCTTCACATTCTCGATGGTGTCCGAAGCCTCGACCTCGAGGGTGATTGTCTTACCCGT 3025 Query 131211 TAGAGTTTTTACGAAAATCTGCATGAC 131237 ||| ||||| ||||| |||||||| || Sbjct 3026 TAGGGTTTTGACGAATATCTGCATTAC 3052 >seq8226 Length=1064 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | ||| | ||| |||||||| ||||| |||||||| Sbjct 785 GCCACCACGAAGACGGAGAACGAGATGGAGGGTTGACTCCTTCTGAATATTGTAATCAGA 844 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| || || | ||| || || ||| |||| || ||||||||||| || || Sbjct 845 AAGGGTGCGGCCATCTTCCAACTGTTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGG 904 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| || || ||||| | || | |||| | || |||| Sbjct 905 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTTTCAATGCTATCAGAGGCTTCGAC 964 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | |||||||| || | || || || || || |||||| Sbjct 965 TTCGAGAGTGATTGTTTTACCAGTCAACGTCTTGACAAAGATTTGCATG 1013 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 131055 GTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTG 131114 |||||| ||| || |||||| |||||| || || || || ||| |||| || ||||| Sbjct 605 GTTGTAGTCGGACAAGGTGCGGCCGTCCTCAAGTTGTTTTCCAGCGAAGATCAATCGCTG 664 Query 131115 CTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATC 131174 |||||| |||||||| ||||| ||||| || || ||||| | || | | || Sbjct 665 CTGGTCTGGAGGGATACCTTCCTTGTCTTGAATCTTGGCCTTGACATTTTCAATGCTGTC 724 Query 131175 GGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | || |||| || | ||||| || || || || || || || || ||||| ||||| Sbjct 725 TGAGGCTTCGACTTCTAAGGTAATTGTCTTGCCAGTAAGGGTCTTGACAAAAATTTGCAT 784 Query 131235 G 131235 | Sbjct 785 G 785 >seq6327 Length=14581 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/166 (73%), Gaps = 6/166 (4%) Strand=Plus/Minus Query 145625 GCGATCGACGCCAAATTACAAACTGCCGTCTCCTC-GGCGTCGCTGTATTGTACGATCTC 145683 || ||||| || ||||| ||||| || || || || | || ||| || ||||| || Sbjct 6506 GCAATCGAAGCTAAATTGCAAACAGCGACTTCATCAGGAGACGA-GTACTGCACGATTTC 6448 Query 145684 GGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATT--ACTTTTCCTGTTG 145741 | ||| | |||| |||||| || ||||| ||||||| ||| || ||||| || ||| Sbjct 6447 AGTGCAGAGATTGGAACATTTAATAGTTCCAAGATTTTTCTGGTTCGACTTT--CTATTG 6390 Query 145742 CACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCG 145787 || || || |||||||||||||| ||| ||||| || | |||| Sbjct 6389 CAAGCATCTTTGTAGAGCATGTAAGGTGTACCAGTTTCAATTTGCG 6344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471928710919680