Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq12388 149 5e-31 seq8226 136 3e-27 seq13049 132 4e-26 seq7750 113 4e-20 seq10049 86.0 5e-12 seq1186 84.2 2e-11 >seq12388 Length=21549 Score = 149 bits (164), Expect = 5e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || || || ||||||||| |||| || ||||| ||| || | Sbjct 15790 ATGCAAATTTTTGTCAAGACGTTGACTGGTAAAACGATCACCCTCGAAGTCGAAGCCTCA 15849 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | | || | ||||| ||||| || ||||||||||| || || ||||||||| Sbjct 15850 GACAGCATTGAGAACGTCAAAGCCAAAATCCAGGACAAGGAGGGAATCCCTCCCGATCAA 15909 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || ||||| || ||| | || ||| ||||||| | || |||||||| Sbjct 15910 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGCACCCTGTCTGATTACAAT 15969 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 ||||| || ||||| || | || || ||| Sbjct 15970 ATTCAGAAGGAATCGACTCTTCACTTGGTT 15999 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || ||||| || || | || ||||||||| |||| || ||||| ||| || Sbjct 15278 AACATGCAGATCTTTGTAAAGACCCTCACTGGTAAAACGATCACCCTAGAAGTCGAAGCC 15337 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | |||| | || | |||| ||||| ||||||||||| || ||||| || || Sbjct 15338 TCTGATAGTATTGAAAACGTCAAGGCCAAAATCCAAGACAAGGAAGGAATTCCTCCAGAC 15397 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||||||||||| || ||||| || ||| | || ||| ||||||| | || || ||| Sbjct 15398 CAGCAACGTCTTATCTTCGCCGGGAAGCAGCTTGAAGATGGCCGCACCCTATCTGACTAC 15457 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTT 22428 || ||||| || || || ||| | ||| | ||| Sbjct 15458 AATATTCAGAAGGAGTCAACCCTCCATCTCGTT 15490 >seq8226 Length=1064 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || || || |||||||| ||||||| ||||| ||| || | Sbjct 1012 ATGCAAATCTTTGTCAAGACGTTGACTGGTAAAACAATCACTCTCGAAGTCGAAGCCTCT 953 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||| | | || | |||| || ||||| ||||||||||| ||||| || || || Sbjct 952 GATAGCATTGAAAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAG 893 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || ||||| |||||||| || ||| ||||||| | || |||||||| Sbjct 892 CAGCGATTGATCTTCGCCGGAAAACAGTTGGAAGATGGCCGCACCCTTTCTGATTACAAT 833 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 ||||| || || || ||| | ||| | ||| Sbjct 832 ATTCAGAAGGAGTCAACCCTCCATCTCGTT 803 Score = 100 bits (110), Expect = 2e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| || || || ||||| ||||||||||| ||||| |||||| Sbjct 484 AAGATTCAGGACAAGGAGGGAATCCCGCCTGATCAGCAACGTCTTATCTTTGCTGGCAAA 425 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 || | |||||| ||||||| | || || ||||| || || ||||| || || Sbjct 424 CAACTTGAGGATGGCCGCACCTTGTCGGACTACAATATCCAGAAAGAGTCAAC 372 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || | || || || || | || | ||||| ||| || | Sbjct 784 ATGCAAATTTTTGTCAAGACCCTTACTGGCAAGACAATTACCTTAGAAGTCGAAGCCTCA 725 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | | || || |||| || |||||||||||||| ||||| || || || || Sbjct 724 GACAGCATTGAAAATGTCAAGGCCAAGATTCAAGACAAGGAAGGTATCCCTCCAGACCAG 665 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || || ||||| | ||||| ||||||| | ||||| |||||| Sbjct 664 CAGCGATTGATCTTCGCTGGAAAACAACTTGAGGACGGCCGCACCTTGTCCGACTACAAC 605 >seq13049 Length=11502 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || || || || || | || ||||||||| ||||||| ||||| ||| || Sbjct 7191 AACATGCAGATCTTCGTGAAGACCCTCACTGGTAAAACGATCACTCTCGAAGTCGAAGCC 7250 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || | | | || | |||| ||||| || ||||| ||||| ||||| || || Sbjct 7251 TCAGACAGCATTGAAAACGTCAAGGCCAAAATCCAGGACAAAGAGGGCATTCCTCCAGAC 7310 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||||||||||| ||||| |||||||| | || ||| ||||||| |||| |||||| Sbjct 7311 CAGCAACGTCTTATCTTTGCTGGCAAACAACTTGAAGATGGCCGCACCCTCTCTGATTAC 7370 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || || || | ||| | ||| | || | || || ||| Sbjct 7371 AACATCCAGAAGGAGTCAACACTCCATCTCGTTCTCCGTCTTCGTGGTGGT 7421 Score = 127 bits (140), Expect = 2e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || || || || || | || ||||||||| ||||||| ||||| ||| || Sbjct 9851 AACATGCAGATCTTCGTGAAGACCCTCACTGGTAAAACGATCACTCTCGAAGTCGAAGCC 9910 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || | | | || | ||||| ||||| || ||||| || || | || || || Sbjct 9911 TCAGACAGCATTGAGAACGTCAAAGCTAAAATCCAGGACAAAGAAGGAACCCCTCCAGAC 9970 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||||||||||| ||||| |||||||| | || || ||||||| | ||||| ||| Sbjct 9971 CAGCAACGTCTTATCTTTGCTGGCAAACAACTTGAAGACGGCCGCACCTTGTCCGACTAC 10030 Query 22396 AACATTCAAAAAGAATCCAC 22415 ||||| ||||||||||| || Sbjct 10031 AACATCCAAAAAGAATCGAC 10050 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || ||||||||| ||||||| ||||| ||| || | Sbjct 10310 ATGCAGATCTTCGTGAAGACCCTCACTGGTAAAACGATCACTCTCGAAGTCGAAGCCTCA 10369 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | | || | ||||| || ||||| ||||| ||||| || || ||||||||| Sbjct 10370 GACAGCATTGAGAACGTCAAAGCCAAGATTCAGGACAAAGAGGGAATCCCTCCCGATCAA 10429 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || ||||| ||||| | |||||| ||||||| | || || |||||| Sbjct 10430 CAGCGATTGATCTTCGCCGGAAAACAACTTGAGGATGGCCGCACCCTGTCTGACTACAAC 10489 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||| ||||| || Sbjct 10490 ATACAAAAGGAATCGAC 10506 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || | || | ||||| ||| || | Sbjct 10082 ATGCAGATCTTTGTCAAGACCCTTACTGGCAAGACAATTACCTTAGAAGTCGAAGCCTCT 10141 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||| | || | ||||| ||||| || |||||||| || || || || || || Sbjct 10142 GATAGTATTGAGAACGTCAAAGCCAAAATCCAGGACAAGGAAGGAATCCCCCCAGACCAG 10201 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| ||||| || || ||| | || ||| ||||||| |||| ||||||||| Sbjct 10202 CAACGTCTTATCTTTGCTGGAAAGCAGCTTGAAGATGGCCGCACCCTCTCTGATTACAAC 10261 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 || || || || || || | ||| | ||| Sbjct 10262 ATCCAGAAGGAGTCAACACTCCATCTCGTT 10291 >seq7750 Length=8304 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| || | ||||| || || ||||||| ||||| ||| | || Sbjct 1723 ATGCAGATCTTCGTTAAGACCCTCACCGGAAAGACAATCACTCTGGAAGTTGAAGCATCC 1664 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || || || || ||||| || ||||| || ||||| Sbjct 1663 GACACTATCGAGAACGTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCCGCCAGATCAG 1604 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || ||||| || || | ||||| || || |||||||||||||| Sbjct 1603 CAGCGCTTGATCTTCGCCGGAAAGCAACTCGAGGACGGTCGTACACTCTCCGATTACAAC 1544 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || |||||| | ||||| ||| |||| | || ||||| Sbjct 1543 ATTCAGAAGGAGTCCACCTTGCATTTGGTTCTGCGTCTCCGTGGAGG 1497 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 ||||||||| ||||| || ||| | || || || || | || || || || ||| || | Sbjct 2937 GATGCAAATCTTTGTGAAGACTCTTACTGGAAAGACCATTACCCTCGAGGTAGAAGCCTC 2878 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || || | || | | || || || || |||||||| || ||||| || || || Sbjct 2877 TGACACAATCGAGAACGTTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCA 2818 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 ||| ||| | || || ||||| || ||| | || || ||| || ||||||| ||||| Sbjct 2817 ACAGCGTTTGATCTTCGCCGGAAAGCAGCTTGAAGACGGCCGTACTCTCTCCGACTACAA 2758 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||||||| || || | ||| | ||| | || ||||||| || Sbjct 2757 CATTCAAAAAGAGTCAACTCTTCATCTTGTTCTCCGTCTGCGCGGTGG 2710 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| ||||| |||||||||| || ||| | || Sbjct 993 ATGCAGATCTTCGTCAAGACACTCACCGGAAAAACCATCACTCTTGAGGTCGAAGCGTCC 934 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| || || || ||||| || || ||||| || ||||| Sbjct 933 GACACAATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGAATTCCTCCAGATCAG 874 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || ||||| || ||| | || || || || ||||||| |||||| Sbjct 873 CAACGCTTGATCTTCGCCGGAAAGCAGCTTGAAGACGGTCGTACTCTCTCCGACTACAAC 814 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 ||||| || || || ||| | ||| | ||| Sbjct 813 ATTCAGAAGGAGTCGACCCTTCATCTCGTT 784 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| | || ||||| || |||||||||| || ||| | || Sbjct 3210 ATGCAGATCTTCGTCAAAACCCTGACTGGTAAGACCATCACTCTTGAGGTCGAAGCTTCC 3151 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| || |||||||||||||| || || || || |||||| Sbjct 3150 GACACTATCGAAAATGTCAAGGCCAAGATTCAAGACAAGGAAGGAATCCCCCCTGATCAA 3091 Query 22339 CAACGTCTTATATTTGCCGGCAA 22361 || ||| | || |||||||| || Sbjct 3090 CAGCGTTTGATCTTTGCCGGTAA 3068 Score = 86.0 bits (94), Expect = 5e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| |||||| |||| || ||||| ||| | | Sbjct 2536 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAAACGATCACACTGGAAGTCGAAGCTTCA 2477 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || || || || |||||||| || ||||| || |||||| Sbjct 2476 GATACCATTGAGAACGTTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCAGATCAA 2417 Query 22339 CAACGTCTTATATTTGCCGG 22358 |||||| | || |||||||| Sbjct 2416 CAACGTTTGATCTTTGCCGG 2397 >seq10049 Length=10599 Score = 86.0 bits (94), Expect = 5e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 22264 GAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGT 22323 ||||| ||| || | |||| | || | ||||| ||||| ||||| ||||| || Sbjct 8573 GAAGTCGAAGCCTCTGATAGTATTGAAAACGTCAAAGCCAAAATCCAAGATAAGGACGGA 8514 Query 22324 ATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACC 22383 || || || || || || || | || ||||| |||||||| | || ||| ||||||| Sbjct 8513 ATCCCGCCAGACCAGCAGCGATTGATCTTTGCTGGCAAACAACTTGAAGATGGCCGCACC 8454 Query 22384 GTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTT 22428 | || || ||||| || || |||||||||||| | ||| | ||| Sbjct 8453 CTGTCTGACTACAATATCCAGAAAGAATCCACCCTCCATCTTGTT 8409 >seq1186 Length=9182 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || |||||| | || || || || | || || ||||| || | | Sbjct 3326 GATGCAGATATTCGTCAAAACTCTCACGGGCAAGACAATTACGCTCGAAGTCGAGGCGTC 3267 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||| ||| | || || | || ||||| || ||||||||||| ||||| || ||||| Sbjct 3266 CGACACCATCGAAAATGTGAAGGCCAAAATCCAGGACAAGGAGGGCATTCCGCCTGATCA 3207 Query 22338 ACAACGTCTTATATTTGCCGGCAA 22361 |||||||||||| || || || || Sbjct 3206 ACAACGTCTTATCTTCGCTGGTAA 3183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419655094820380