Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq6362 100 6e-16 seq2741 100 6e-16 seq341 100 6e-16 seq13986 98.7 2e-15 seq11845 98.7 2e-15 seq9784 98.7 2e-15 seq7702 98.7 2e-15 seq7321 98.7 2e-15 seq5810 98.7 2e-15 seq4353 98.7 2e-15 seq3764 98.7 2e-15 seq3609 98.7 2e-15 seq2916 98.7 2e-15 seq431 98.7 2e-15 seq4718 96.9 7e-15 seq10471 95.1 2e-14 seq8192 95.1 2e-14 seq12558 89.7 1e-12 >seq6362 Length=19396 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||| Sbjct 2150 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 2209 Query 142563 CCCCACATCGGGC 142575 |||| |||||||| Sbjct 2210 CCCCGCATCGGGC 2222 >seq2741 Length=23777 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||| Sbjct 2378 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 2319 Query 142563 CCCCACATCGGGC 142575 |||| |||||||| Sbjct 2318 CCCCGCATCGGGC 2306 >seq341 Length=15654 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||| Sbjct 3859 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 3800 Query 142563 CCCCACATCGGGC 142575 |||| |||||||| Sbjct 3799 CCCCGCATCGGGC 3787 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 8420 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 8361 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 8360 CCCGCATCGGGC 8349 >seq13986 Length=18737 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 5747 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 5688 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 5687 CCCGCATCGGGC 5676 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 8891 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 8832 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 8831 CCCGCATCGGGC 8820 >seq11845 Length=12048 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 10072 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 10131 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 10132 CCCGCATCGGGC 10143 >seq9784 Length=24248 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 18042 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 18101 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 18102 CCCGCATCGGGC 18113 >seq7702 Length=20245 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 12052 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 12111 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 12112 CCCGCATCGGGC 12123 >seq7321 Length=16743 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 13220 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 13279 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 13280 CCCGCATCGGGC 13291 >seq5810 Length=22038 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 1080 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 1139 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 1140 CCCGCATCGGGC 1151 >seq4353 Length=9151 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 222 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 163 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 162 CCCGCATCGGGC 151 >seq3764 Length=56339 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 17462 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 17403 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 17402 CCCGCATCGGGC 17391 >seq3609 Length=6113 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 3824 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 3883 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 3884 CCCGCATCGGGC 3895 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||||||||| |||| | |||||| |||||| | |||| ||| |||||| Sbjct 4142 GCCCGGTTAGCTCAGTCGGTGGAGCACCAGACTCATAATCTGGCTGTCGCGGGCTCGAGC 4201 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 4202 CCCGCATCGGGC 4213 >seq2916 Length=4313 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 2504 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 2563 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 2564 CCCGCATCGGGC 2575 >seq431 Length=4892 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 4775 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 4716 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 4715 CCCGCATCGGGC 4704 >seq4718 Length=5016 Score = 96.9 bits (106), Expect = 7e-15 Identities = 69/78 (88%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 142498 GAGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGT 142557 ||||| ||||||||||||| ||||||||||| | ||||||||||||| | |||| |||| Sbjct 2692 GAGAT-GCCCGGTTAGCTCCGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGT 2634 Query 142558 TCGAGCCCCACATCGGGC 142575 ||||||||| |||||||| Sbjct 2633 TCGAGCCCCGCATCGGGC 2616 >seq10471 Length=11420 Score = 95.1 bits (104), Expect = 2e-14 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||| Sbjct 9231 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 9290 Query 142563 CCCCACATCG 142572 |||| ||||| Sbjct 9291 CCCCGCATCG 9300 >seq8192 Length=7403 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||| Sbjct 2139 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCAGGTTCGAGC 2198 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 2199 CCCGCATCGGGC 2210 >seq12558 Length=52346 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/73 (88%), Gaps = 2/73 (3%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | | |||||||||| | |||| ||||||||| Sbjct 11531 AGCCCGGTTAGCTCAGTCGGTAGAGCACCA--CTCTTAATCTGGCTGTCGCGGGTTCGAG 11474 Query 142563 CCCCACATCGGGC 142575 |||| |||||||| Sbjct 11473 CCCCGCATCGGGC 11461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027649113145932