Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq8226 86.0 5e-12 seq7750 86.0 5e-12 >seq8226 Length=1064 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968 || || || || ||||| || || |||||||||||| |||||||| | || || || Sbjct 795 AGACGGAGAACGAGATGGAGGGTTGACTCCTTCTGAATATTGTAATCAGA-AAGGGTGCG 853 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 | || ||||| || || ||||| || |||| |||||||| || || | || ||| Sbjct 854 GCCATCTTCCAACTGTTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTC 913 Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGT 34088 |||||| ||| || ||| | | | ||||||| | |||| ||||| || Sbjct 914 CTTGTCCTGAATCTTGGCCTTGACGTTTTCAATGCTATCAGAGGCTTCGACTTCGAGAGT 973 Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 |||||||| || || | || || |||||||||||||| Sbjct 974 GATTGTTTTACCAGTCAACGTCTTGACAAAGATTTGCAT 1012 >seq7750 Length=8304 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| | || ||||| |||| ||| | ||| ||||||||||||||||||||| | Sbjct 1497 CCTCCACGGAGACGCAGAACCAAATGCAAGGTGGACTCCTTCTGAATGTTGTAATCGGAG 1556 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | | || |||| || | |||||| ||||| || |||| |||||||||||| ||| Sbjct 1557 AGTGTACGACCGTCCTCGAGTTGCTTTCCGGCGAAGATCAAGCGCTGCTGATCTGGCGGA 1616 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGCA 34079 | | || || ||| || || ||| | | ||| | | | || | | ||| Sbjct 1617 ATTCCTTCCTTATCCTGGATCTTGGCCTTGA-CGTTCTCGATAGTGTCGGATGCTTCAAC 1675 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 ||| | || ||||| |||||||| || || || || ||||| |||||| Sbjct 1676 TTCCAGAGTGATTGTCTTTCCGGTGAGGGTCTTAACGAAGATCTGCATT 1724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396993431750104