Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq7750 149 1e-30 seq13049 147 5e-30 seq12388 127 5e-24 seq10049 123 6e-23 seq1186 114 3e-20 seq10950 109 1e-18 seq11914 93.3 1e-13 >seq7750 Length=8304 Score = 149 bits (164), Expect = 1e-30 Identities = 173/232 (75%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | ||| |||||||||| || || || || || || ||||||| Sbjct 766 TCCACCACGAAGACGAAGAACGAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGA 825 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || || |||||||| | || ||||| |||||||||| || || ||| ||||| Sbjct 826 GAGAGTACGACCGTCTTCAAGCTGCTTTCCGGCGAAGATCAAGCGTTGCTGA---TCTGG 882 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||||||||||| |||||||| || || || || ||||| || | ||| || ||| Sbjct 883 AGGAATTCCTTCTTTGTCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCGGACGCTTC 942 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || ||||| || || ||||| || ||||||||||| ||||||||| Sbjct 943 GACCTCAAGAGTGATGGTTTTTCCGGTGAGTGTCTTGACGAAGATCTGCATT 994 Score = 140 bits (154), Expect = 8e-28 Identities = 171/232 (74%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || ||||| | || || | ||| | ||| || || || || || || |||| Sbjct 1496 TCCTCCACGGAGACGCAGAACCAAATGCAAGGTGGACTCCTTCTGAATGTTGTAATCGGA 1555 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || || ||||| || | ||| ||||| |||||||||| ||||| ||| ||||| Sbjct 1556 GAGTGTACGACCGTCCTCGAGTTGCTTTCCGGCGAAGATCAAGCGCTGCTGA---TCTGG 1612 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 |||||||| ||||||||||| || || || ||||| || |||| ||| | ||| Sbjct 1613 CGGAATTCCTTCCTTATCCTGGATCTTGGCCTTGACGTTCTCGATAGTGTCGGATGCTTC 1672 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || ||||| ||||| ||||| || ||||| ||||| ||||||||| Sbjct 1673 AACTTCCAGAGTGATTGTCTTTCCGGTGAGGGTCTTAACGAAGATCTGCATT 1724 Score = 136 bits (150), Expect = 9e-27 Identities = 170/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || || | || |||||||||| || || || ||||| || ||||| | Sbjct 994 TCCTCCACGCAGCCGGAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 1053 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| || ||||| | || ||||| |||||||||| || || ||| ||||| Sbjct 1054 AAGAGTGCGCCCATCTTCGAGCTGCTTTCCGGCGAAGATCAACCGTTGCTGA---TCTGG 1110 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 |||||||| ||||||||||| || || || || ||||| || | ||| || ||| Sbjct 1111 AGGAATTCCTTCCTTATCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCGGACGCTTC 1170 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || ||||| || || ||||| || ||||||||||| ||||||||| Sbjct 1171 GACCTCAAGAGTGATGGTTTTTCCGGTGAGTGTCTTGACGAAGATCTGCATT 1222 Score = 107 bits (118), Expect = 5e-18 Identities = 111/144 (77%), Gaps = 6/144 (4%) Strand=Plus/Plus Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTC 288390 || || ||||||| ||| |||||| ||||| |||||||| || |||||||| || Sbjct 2397 CCGGCAAAGATCAAACGTTGTTGA---TCTGGAGGAATTCCTTCCTTGTCCTGGATCTTG 2453 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || || ||||| || || | ||| | ||| ||||| || |||||||| || ||||| Sbjct 2454 GCCTTAACGTTCTCAATGGTATCTGAAGCTTCGACTTCCAGTGTGATCGTTTTTCCGGTG 2513 Query 288451 AGAGTCTTGACGAATATCTGCATT 288474 |||||||||||||| ||||||||| Sbjct 2514 AGAGTCTTGACGAAGATCTGCATT 2537 Score = 102 bits (112), Expect = 2e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || || ||||||| |||||||||| | ||||||||||| || || || || || Sbjct 3068 TTACCGGCAAAGATCAAACGCTGTTGATCAGGGGGGATTCCTTCCTTGTCTTGAATCTTG 3127 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || || || ||||| |||| ||| | ||| || || || ||||| ||||| || ||| Sbjct 3128 GCCTTGACATTTTCGATAGTGTCGGAAGCTTCGACCTCAAGAGTGATGGTCTTACCAGTC 3187 Query 288451 AGAGTCTTGACGAATATCTGCATT 288474 || || |||||||| ||||||||| Sbjct 3188 AGGGTTTTGACGAAGATCTGCATT 3211 Score = 100 bits (110), Expect = 7e-16 Identities = 111/147 (76%), Gaps = 6/147 (4%) Strand=Plus/Plus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATT 288387 || || |||||||||| |||||||| |||||| |||||||| || ||||||||| Sbjct 1353 TTACCGGCGAAGATCAAGCGCTGTTGG---TCTGGGGGAATTCCTTCCTTGTCCTGGATT 1409 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 || || || || ||||| || | || || ||| || || || || || ||||| ||| Sbjct 1410 TTGGCCTTGACATTTTCGATTGTGTCAGACGCTTCGACCTCAAGGGTAATGGTCTTTCCG 1469 Query 288448 GTCAGAGTCTTGACGAATATCTGCATT 288474 |||| ||| || ||||| ||||||||| Sbjct 1470 GTCAAAGTTTTTACGAAGATCTGCATT 1496 >seq13049 Length=11502 Score = 147 bits (162), Expect = 5e-30 Identities = 175/235 (74%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| | || || | |||| || |||||||||||| || |||| Sbjct 10084 CATG-CCACCACGGAGACGGAGGACCAAGTGAAGAGTCGATTCTTTTTGGATGTTGTAGT 10026 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| | ||||| |||||||| | |||||| || || ||||| ||||| || || | Sbjct 10025 CGGACAAGGTGCGGCCGTCTTCAAGTTGTTTGCCAGCAAAGATAAGACGTTGCTGG---T 9969 Query 288362 CTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 |||| | |||||||||| ||||||||||| ||||| ||||| || || || | Sbjct 9968 CTGGAGGGGTTCCTTCTTTGTCCTGGATTTTAGCTTTGACGTTCTCAATGCTGTCTGAGG 9909 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| |||||||| |||||||| || || || || ||||| ||||| |||||||| Sbjct 9908 CTTCGACTTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCAT 9854 Score = 123 bits (136), Expect = 6e-23 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || |||||||| | || || || ||||| || || || | | Sbjct 7420 CCACCACGAAGACGGAGAACGAGATGGAGTGTTGACTCCTTCTGGATGTTGTAATCAGAG 7361 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | |||||| || || ||||| ||||| || || ||||| Sbjct 7360 AGGGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATAAGACGTTGCTGG---TCTGGA 7304 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || ||||| ||||||||||| || || |||||||| || || | ||| Sbjct 7303 GGAATGCCCTCTTTGTCCTGGATTTTGGCCTTGACGTTTTCAATGCTGTCTGAGGCTTCG 7244 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| |||||||| || || || || ||||| ||||| |||||||| Sbjct 7243 ACTTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCAT 7194 Score = 123 bits (136), Expect = 6e-23 Identities = 170/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || |||||||| | || || || ||||| || || | Sbjct 10312 CATG-CCACCACGAAGACGGAGAACGAGATGGAGTGTTGACTCCTTCTGGATGTTGTAAT 10254 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | ||| ||||| || ||||| | || ||||| || ||||| ||||| || || | Sbjct 10253 CAGAGAGGGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAGATAAGACGTTGCTGG---T 10197 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 ||||| |||||||| || ||||||||||| ||||| ||||| || ||| ||| | Sbjct 10196 CTGGGGGGATTCCTTCCTTGTCCTGGATTTTGGCTTTGACGTTCTCAATACTATCAGAGG 10137 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| ||||| | || || ||||| || || || |||||||| || |||||||| Sbjct 10136 CTTCGACTTCTAAGGTAATTGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 10082 >seq12388 Length=21549 Score = 127 bits (140), Expect = 5e-24 Identities = 163/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 288249 ACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAG 288308 ||| ||||| | || || | |||| || ||| || || ||||| || || | || Sbjct 16014 ACCACGGAGACGGAGAACCAAGTGAAGAGTCGATTCCTTCTGAATATTGTAATCAGACAG 15955 Query 288309 CGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGAT 288368 ||||| || ||||| | || ||||| |||||||| |||||||||||| ||||| Sbjct 15954 GGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGGAT 15895 Query 288369 TCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTC 288428 ||| || || ||||||||||| ||||| ||||| || || || | ||| ||||| Sbjct 15894 TCCCTCCTTGTCCTGGATTTTGGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTC 15835 Query 288429 GAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| |||||||| || || |||| |||||||| || || ||||| Sbjct 15834 GAGGGTGATCGTTTTACCAGTCAACGTCTTGACAAAAATTTGCAT 15790 >seq10049 Length=10599 Score = 123 bits (136), Expect = 6e-23 Identities = 170/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || ||||| || | || || || || ||||| |||| Sbjct 9168 CATG-CCACCACGAAGACGGAGAACGAGGTGGAGGGTTGACTCCTTCTGAATATTGTAGT 9226 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || || || |||||||| | || ||||| |||||||||| ||||| || | Sbjct 9227 CGGAAAGAGTACGACCGTCTTCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGG---T 9283 Query 288362 CTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 |||| ||||||||| || |||||||| || || || ||||| || || ||| | Sbjct 9284 CTGGCGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGCTATCAGAGG 9343 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| |||||||| ||||| || || || || || ||||| ||||| |||||||| Sbjct 9344 CTTCGACTTCGAGAGTGATGGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCAT 9398 >seq1186 Length=9182 Score = 114 bits (126), Expect = 3e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || |||||||| ||||| |||||| | || || || || || ||||||||||| Sbjct 3183 TTACCAGCGAAGATAAGACGTTGTTGATCAGGCGGAATGCCCTCCTTGTCCTGGATTTTG 3242 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || ||||| ||||| || | ||| || || ||||||||||| || ||||| || || Sbjct 3243 GCCTTCACATTTTCGATGGTGTCGGACGCCTCGACTTCGAGCGTAATTGTCTTGCCCGTG 3302 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||||||||||||||| Sbjct 3303 AGAGTTTTGACGAATATCTGCAT 3325 >seq10950 Length=25243 Score = 109 bits (120), Expect = 1e-18 Identities = 116/152 (76%), Gaps = 6/152 (4%) Strand=Plus/Plus Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCT 288382 ||||| | || ||||| || || || ||||| ||||| ||||||||||||||||| Sbjct 24609 ATTGTATACCGGCGAAAATAAGGCGTTGTTGG---TCTGGAGGGATTCCTTCTTTATCCT 24665 Query 288383 GGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCT 288442 ||||||| || || ||||| || || | || | ||| |||||||| ||||| || | Sbjct 24666 GGATTTTGGCCTTGACGTTCTCAATGGTGTCTGACCCTTCGACTTCGAGGGTGATGGTTT 24725 Query 288443 TCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 | ||||||| ||||||||| || || |||||| Sbjct 24726 TTCCGGTCAAAGTCTTGACAAAGATTTGCATT 24757 >seq11914 Length=36757 Score = 93.3 bits (102), Expect = 1e-13 Identities = 110/148 (74%), Gaps = 6/148 (4%) Strand=Plus/Plus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATT 288387 || || |||||||| || ||||| || ||||| ||||||||| || |||||||| Sbjct 2907 TTACCGGCGAAGATGAGGCGCTGCTGG---TCTGGAGGGATTCCTTCCTTGTCCTGGATC 2963 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 || || ||||| || || || | || | || || ||||| ||||| ||||| || Sbjct 2964 TTGGCCTTCACATTCTCGATGGTGTCCGAAGCCTCGACCTCGAGGGTGATTGTCTTACCC 3023 Query 288448 GTCAGAGTCTTGACGAATATCTGCATTA 288475 || || || ||||||||||||||||||| Sbjct 3024 GTTAGGGTTTTGACGAATATCTGCATTA 3051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179438990682856