Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq6327 156 5e-33 seq2468 82.4 9e-11 >seq6327 Length=14581 Score = 156 bits (172), Expect = 5e-33 Identities = 470/719 (65%), Gaps = 45/719 (6%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| |||| |||||| ||||||| | |||||||| || | |||||| || |||||| Sbjct 7538 TAGATGTTGGACGTGTAGGGCTCAATCGATTCATTGTTTCCAAGGATTTGAGCTGTGGAG 7479 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || || ||||| || || | ||||| |||||||| | || | | | || ||| Sbjct 7478 GCCGTTGGCATTGGGGCGAGAAGAAGACTGTTACGCACTCCATGCTTCGCGATTTTCTCC 7419 Query 114062 TTGAGGGCGTCCCAGTCGTAGT----TG-----AGCTTTGTCTCCCC-----CTG----C 114103 || || || |||| | | | | || || || || || ||| | Sbjct 7418 TTCAGAGCTACCCAATTGCACTGATCTGTAGGAAGAACTGGCTTTCCATCTTCTGTATTC 7359 Query 114104 CACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGG 114163 ||||| ||| | || || || |||||| | || || || || | ||||| || | Sbjct 7358 CACATTTCATATTGAAGAATTCCTTGGCTTACAGGAGACCCTTCGTACGTCTCATAAGTA 7299 Query 114164 CCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAA 114223 || | ||| || ||||| ||| ||||| || || | || || || || ||||| Sbjct 7298 CCATATTTCTCAGCTAATTCAGAGGATGCCTCAAGAGCACCATGGTAAATGGTTTCAAAG 7239 Query 114224 ATGC-------GAGCATTCATTGCCTTG--GCCTCGTCGGAATCAAACGCGAGTCGGCA- 114273 || | ||| ||| |||| | || || |||| || | ||| Sbjct 7238 ATTCTCTTGTTGAGA--TCACGAGCTTGAGGACTAGTG-------AACG-GATACCGCAT 7189 Query 114274 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 114333 ||| || || |||| || | |||||| || |||| |||||||||||||| | | | || Sbjct 7188 CAACATGAAAGCATCTGCTAAACCTTGAACTCCGATTCCAATTGGGCGATGACGCTTGTT 7129 Query 114334 AGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 114393 || || ||| || ||||| ||||| | ||||||| | || || || Sbjct 7128 TGATGTTTCAGCTTCGGGAACCGGATAGAAATTGCAGTCGATAATTTTGTTAAGGTTACG 7069 Query 114394 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 114453 ||||||||||| || ||| ||||||||||||||||||||||| | | ||||| || Sbjct 7068 TGTGACAACCTTGGTAATTGCATGAAGCTTTTCGTAATCAAAAGTTT---TGTCTTCTTT 7012 Query 114454 GACATACTTAGGA--AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 114511 ||| | | || || || || || || | ||| || |||| | ||||| | Sbjct 7011 GACGAA--TCGGTTCAGAGCAATCGAAGCTAAATTGCAAACAGCGACTTCATCAGGAGAC 6954 Query 114512 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 114571 | ||||| | ||||||||||| | ||| |||| |||||| || || | || || ||| Sbjct 6953 GAGTACTGCACGATTTCCGTACAGAGATTGGAACACTTAATAGTTCCAAGATTTTTCTGA 6894 Query 114572 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 114630 || |||||| | || || ||||| |||||||||||||| || | || || || |||| Sbjct 6893 TTCGACTTTCTATTGCAAGCATCTTTGTAAAGCATGTACGGTATACCAGTTTCAATTTG 6835 Score = 109 bits (120), Expect = 7e-19 Identities = 232/341 (68%), Gaps = 9/341 (3%) Strand=Plus/Minus Query 114296 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTTCGAGCGGTCTCCAC 114354 ||||| || |||| |||||||||||||| | | | || || ||||| ||| || Sbjct 6677 CCTTGAACTCCGATTCCAATTGGGCGATGACGCTTGTTTGATCTTTC-AGCTTCGGGAAC 6619 Query 114355 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 114414 ||||| |||| | || |||| | | || || || |||| |||||| || || | Sbjct 6618 CGGATAGTAATTGCAGTCAATAATCTTGTTAAGGTTACGTGTGATAACCTTGGTAATCGC 6559 Query 114415 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGG--AAGGGCG 114472 ||||||||||||||||||||| | | ||||| ||||| | | || || || Sbjct 6558 ATGAAGCTTTTCGTAATCAAA---GGTTTTGTCTTCTTTGAC--GCATCGGTTCAGAGCA 6504 Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532 || || || | ||| || |||| | ||||| | | ||||| | ||||| || Sbjct 6503 ATCGAAGCTAAATTGCAAACAGCGACTTCATCAGGAGACGAGTACTGCACGATTTCAGTG 6444 Query 114533 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 114592 || | ||| |||| ||||| || || | || || || || |||||| | || || ||| Sbjct 6443 CAGAGATTGGAACATTTAATAGTTCCAAGATTTTTCTGGTTCGACTTTCTATTGCAAGCA 6384 Query 114593 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 114633 || ||||| |||||||| || || || || || |||| || Sbjct 6383 TCTTTGTAGAGCATGTAAGGTGTACCAGTTTCAATTTGCGA 6343 >seq2468 Length=4028 Score = 82.4 bits (90), Expect = 9e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 || || ||| | ||||| || || || || || || |||||||| | || || Sbjct 3112 GCGAAATCTCGATGGAGTCCTTCATCTCGTGAAATTAGTTCATTGCTGTGAGTCAACCCA 3171 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 |||||||| || |||||||||||||| ||||| ||| ||| || || ||||| |||||| Sbjct 3172 GGCATGAGTCCACGCTTCTTCAACCAAAAAATGGCAGCAAACGATCCGGAGAAAAAGATT 3231 Query 126167 CCCTCCAC 126174 || ||||| Sbjct 3232 CCTTCCAC 3239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597247181456160