Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq7750 131 2e-25 seq12388 120 3e-22 seq13049 116 4e-21 seq10049 95.1 1e-14 seq8226 89.7 5e-13 >seq7750 Length=8304 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||||| | || || ||||||| || || ||||||||||||||||| || | | Sbjct 2710 CCACCGCGCAGACGGAGAACAAGATGAAGAGTTGACTCTTTTTGAATGTTGTAGTCGGAG 2769 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || |||||||||||||||| ||||| | || | ||||| ||||| || ||| Sbjct 2770 AGAGTACGGCCGTCTTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCTGGGGGA 2829 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 |||||||| || || || || || ||| || ||| | ||| ||| ||| || || Sbjct 2830 ATTCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTCTCGATTGTGTCAGAGGCTTCTACC 2889 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||| || || | ||| || || || |||||||| Sbjct 2890 TCGAGGGTAATGGTCTTTCCAGTAAGAGTCTTCACAAAGATTTGCAT 2936 Score = 120 bits (132), Expect = 3e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||||| ||||| || || ||||||||||| || | || || || |||| Sbjct 781 AAGAACGAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGACCGTC 840 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||||||||| ||||| | || | || ||||| || ||||||||||||||||| || Sbjct 841 TTCAAGCTGCTTTCCGGCGAAGATCAAGCGTTGCTGATCTGGAGGAATTCCTTCTTTGTC 900 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| ||| || | ||| || || || || || | ||| | ||| Sbjct 901 CTGGATCTTGGCCTTGACATTTTCGATTGTGTCGGACGCTTCGACCTCAAGAGTGATGGT 960 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || ||||| | || || ||||| || |||||| Sbjct 961 TTTTCCGGTGAGTGTCTTGACGAAGATCTGCATT 994 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| ||||| || || || |||||||| || | | |||||| | ||| Sbjct 1010 AGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATCT 1069 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| ||||| | || | ||| ||||| || |||||||||||||| || || Sbjct 1070 TCGAGCTGCTTTCCGGCGAAGATCAACCGTTGCTGATCTGGAGGAATTCCTTCCTTATCC 1129 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | ||| || || || || || | ||| | ||| Sbjct 1130 TGGATCTTGGCCTTGACATTTTCGATTGTGTCGGACGCTTCGACCTCAAGAGTGATGGTT 1189 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || ||||| | || || ||||| || |||||| Sbjct 1190 TTTCCGGTGAGTGTCTTGACGAAGATCTGCATT 1222 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 64300 CTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 ||| ||||| | || | ||||| ||||| || ||||||||||| || || || ||||| Sbjct 1352 CTTACCGGCGAAGATCAAGCGCTGTTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATTTT 1411 Query 64360 TTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 ||| ||| || | ||| ||| || || || || | || | |||||| ||||| Sbjct 1412 GGCCTTGACATTTTCGATTGTGTCAGACGCTTCGACCTCAAGGGTAATGGTCTTTCCGGT 1471 Query 64420 CAAAGTTTTTACGAAAATTTGCATT 64444 ||||||||||||||| || |||||| Sbjct 1472 CAAAGTTTTTACGAAGATCTGCATT 1496 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || |||||||||||||| | || || || |||| || || ||||| ||| Sbjct 1527 GTGGACTCCTTCTGAATGTTGTAATCGGAGAGTGTACGACCGTCCTCGAGTTGCTTTCCG 1586 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || | |||||||| || || ||||||||||| || || || || || ||| Sbjct 1587 GCGAAGATCAAGCGCTGCTGATCTGGCGGAATTCCTTCCTTATCCTGGATCTTGGCCTTG 1646 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || || || ||||| | ||| | ||||| ||||| | || Sbjct 1647 ACGTTCTCGATAGTGTCGGATGCTTCAACTTCCAGAGTGATTGTCTTTCCGGTGAGGGTC 1706 Query 64427 TTTACGAAAATTTGCATT 64444 || ||||| || |||||| Sbjct 1707 TTAACGAAGATCTGCATT 1724 >seq12388 Length=21549 Score = 120 bits (132), Expect = 3e-22 Identities = 153/206 (74%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| |||||||| || ||||| |||||||| | | |||||| | |||||||||||| Sbjct 15992 TGAAGAGTCGATTCCTTCTGAATATTGTAATCAGACAGGGTGCGGCCATCTTCAAGCTGC 15933 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || ||||| | ||||| ||||| || |||||||| ||||| || || || || | |||| Sbjct 15932 TTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGGA-TTTT 15874 Query 64361 TGCTTT-ACAACCTCCA--CTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 ||||| || ||| | |||| | | ||| || ||||| | || | || || || Sbjct 15873 GGCTTTGACGTTCTCAATGCTGTCTGA--GGCTTCGACTTCGAGGGTGATCGTTTTACCA 15816 Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || || || ||||||||||| Sbjct 15815 GTCAACGTCTTGACAAAAATTTGCAT 15790 Score = 113 bits (124), Expect = 5e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||| | || || || || ||||| ||||| || | | |||||| | |||||| Sbjct 15489 ACGAGATGGAGGGTTGACTCCTTCTGAATATTGTAGTCAGATAGGGTGCGGCCATCTTCA 15430 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 |||||||| ||||| | || || || |||||||| |||||||||||||| || ||||| Sbjct 15429 AGCTGCTTCCCGGCGAAGATAAGACGTTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGG 15370 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 ||||| ||| || || | ||||| ||| || ||||||| || | || || Sbjct 15369 ATTTTGGCCTTGACGTTTTCAATACTATCAGAGGCTTCGACTTCTAGGGTGATCGTTTTA 15310 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCATTTTAAT 64449 || || | || ||||| || || ||||| || || Sbjct 15309 CCAGTGAGGGTCTTTACAAAGATCTGCATGTTGAT 15275 >seq13049 Length=11502 Score = 116 bits (128), Expect = 4e-21 Identities = 154/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| |||||||||||||| |||||||| || | | |||||| |||||||||| || Sbjct 10056 TGAAGAGTCGATTCTTTTTGGATGTTGTAGTCGGACAAGGTGCGGCCGTCTTCAAGTTGT 9997 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 ||||| ||| | || || || |||||||| ||||| |||||||||| || || | |||| Sbjct 9996 TTGCCAGCAAAGATAAGACGTTGCTGGTCTGGAGGGGTTCCTTCTTTGTCCTGGA-TTTT 9938 Query 64361 TGCTTT-ACAACCTCCA--CTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 ||||| || ||| | |||| | | ||| || ||||| | ||| | || || || Sbjct 9937 AGCTTTGACGTTCTCAATGCTGTCTGA--GGCTTCGACTTCGAGAGTGATCGTTTTACCA 9880 Query 64418 GTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || || ||||| || ||||| || Sbjct 9879 GTGAGGGTCTTCACGAAGATCTGCATGTT 9851 Score = 116 bits (128), Expect = 4e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || || || || ||||||||||| | || |||||| | ||| Sbjct 10293 AGAACGAGATGGAGTGTTGACTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCT 10234 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||| || ||| | || || || |||||||| || || |||||||| || || Sbjct 10233 TCAAGCTGCTTTCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGGATTCCTTCCTTGTCC 10174 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | |||| ||||| || ||| | ||||| ||| || ||||||| || | || Sbjct 10173 TGGA-TTTTGGCTTTGACGTTCTCAATACTATCAGAGGCTTCGACTTCTAAGGTAATTGT 10115 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | || || || || || ||||| Sbjct 10114 CTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 10082 Score = 102 bits (112), Expect = 8e-17 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || || || || ||||||||||| | || |||||| | ||| Sbjct 7405 AGAACGAGATGGAGTGTTGACTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCT 7346 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||| || ||||| ||| | || || || |||||||| |||||||| || ||||| || Sbjct 7345 TCAAGTTGTTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGAGGAATGCCCTCTTTGTCC 7286 Query 64352 TGTATTTTTTGCTTTACAACCTCCA--CTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 || ||||| ||| || || | |||| | | ||| || ||||| | ||| | | Sbjct 7285 TGGATTTTGGCCTTGACGTTTTCAATGCTGTCTGA--GGCTTCGACTTCGAGAGTGATCG 7228 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 | || || || | || || ||||| || ||||| || Sbjct 7227 TTTTACCAGTGAGGGTCTTCACGAAGATCTGCATGTT 7191 >seq10049 Length=10599 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || ||||| ||||| || | | || || |||||||||||||||| ||| Sbjct 9202 GTTGACTCCTTCTGAATATTGTAGTCGGAAAGAGTACGACCGTCTTCAAGCTGCTTTCCG 9261 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || | ||||||||||| || || |||||||| || || || || || ||| Sbjct 9262 GCGAAGATCAATCGCTGCTGGTCTGGCGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTG 9321 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | ||||| ||| || ||||| | ||| | ||| || || || | || Sbjct 9322 ACGTTCTCAATGCTATCAGAGGCTTCGACTTCGAGAGTGATGGTTTTACCAGTGAGGGTC 9381 Query 64427 TTTACGAAAATTTGCATTTT 64446 || ||||| || ||||| || Sbjct 9382 TTCACGAAGATCTGCATGTT 9401 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || |||||||| || || ||||| || | | |||||| | ||| Sbjct 8407 AGAACAAGATGGAGGGTGGATTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCT 8466 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||| || ||||| ||| | || | ||||||||||| || || ||||| || || ||| Sbjct 8467 TCAAGTTGTTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGCGGGATTCCGTCCTTATCT 8526 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTA 64400 || | |||| ||||| || || | ||||| ||| || ||||||| Sbjct 8527 TGGA-TTTTGGCTTTGACGTTTTCAATACTATCAGAGGCTTCGACTTCTA 8575 >seq8226 Length=1064 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || || || ||||| |||||||| | | |||||| | ||| Sbjct 801 AGAACGAGATGGAGGGTTGACTCCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCT 860 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | ||| || ||||| | || | ||||||||||| || ||||| || || || || Sbjct 861 TCCAACTGTTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 920 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | ||||| ||| || ||||| | ||| | || Sbjct 921 TGAATCTTGGCCTTGACGTTTTCAATGCTATCAGAGGCTTCGACTTCGAGAGTGATTGTT 980 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || ||||| || || || || |||||||| Sbjct 981 TTACCAGTCAACGTCTTGACAAAGATTTGCAT 1012 Score = 84.2 bits (92), Expect = 2e-11 Identities = 129/182 (71%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 64264 GTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTG 64323 |||||| || | | |||||| |||| ||||| || || || || | || | ||||| Sbjct 605 GTTGTAGTCGGACAAGGTGCGGCCGTCCTCAAGTTGTTTTCCAGCGAAGATCAATCGCTG 664 Query 64324 CTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCA--CTGTA 64381 |||||| ||||| || ||||| || ||||| || || ||| ||| || | |||| Sbjct 665 CTGGTCTGGAGGGATACCTTCCTTGTCTTGAATCTTGGCCTTGACATTTTCAATGCTGTC 724 Query 64382 TCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGC 64441 | | ||| || ||||||| || | |||||||| || | || || || ||||||||| Sbjct 725 TGA--GGCTTCGACTTCTAAGGTAATTGTCTTGCCAGTAAGGGTCTTGACAAAAATTTGC 782 Query 64442 AT 64443 || Sbjct 783 AT 784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499555788278880