Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_011222.1 Length=44929 Score E Sequences producing significant alignments: (Bits) Value seq4099 91.5 4e-14 >seq4099 Length=1469 Score = 91.5 bits (100), Expect = 4e-14 Identities = 175/253 (69%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 20257 CTGTACCAAAGAAGCGCAGACCTATTTTTAGGCGTTCCTTTCAATATTGCATCTTATTCT 20316 || || ||| | ||||| ||| |||||||||| ||||||||||||||||| |||||| | Sbjct 979 CTTTATCAACGTAGCGCCGACATATTTTTAGGTGTTCCTTTCAATATTGCCTCTTATGCG 920 Query 20317 ATCTTGCTGTCTATGGCTGCACAGGTTTGCGGT-TTAAAGCCTCGTAGATTCATTCATAC 20375 | ||| | |||| ||||| || || | | | ||||| | | ||| || ||||| Sbjct 919 CTGTTGACGATGATGGTGGCACAAGTCTGTGATATGGAAGCCGC-TGAATTTATCCATAC 861 Query 20376 GATCGGTGACGGACATATATATTTGAATCACGTTGAGCAGGTGAAAGAACAATTGAGTAG 20435 | || || | |||||| ||| |||||| |||| || | || ||| ||||| | Sbjct 860 ATTGGGCGATGCACATATCTATAGCAATCACTTTGAACAAACGGAACTACAGTTGAGCCG 801 Query 20436 AGAGCCGTTTGCCCTT-CCAAAATTGGAGCTAAACCCAAATGTTCGTAATATATTCGATT 20494 || || ||| || ||| || || || |||||||| | || |||| || |||| Sbjct 800 TGATCC-AAAGCCATTGCCACAAATGAAGATAAACCCAGAGGTGAAAGATATTTTTGATT 742 Query 20495 TTAAGTATGAAGA 20507 | || | ||||| Sbjct 741 TCAAATTCGAAGA 729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143626888111784