Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq13762 174 2e-38 seq11715 86.0 7e-12 >seq13762 Length=1749 Score = 174 bits (192), Expect = 2e-38 Identities = 135/161 (84%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 156088 GTGTTCACCGGCCTGACGATGCTGGACACCATCCAGGGCACCGTCGGCGCGGTCTCGCTC 156147 ||||||||||| || || |||| ||||| |||||||||||||||||||||||||| || Sbjct 169 GTGTTCACCGGTCTCACCCTGCTCGACACGATCCAGGGCACCGTCGGCGCGGTCTCCCTG 110 Query 156148 ATCCCGGACGCCATCACCCCGCACGAGGAGGCGGTGTACACCAACATCGCGTTCATGGAG 156207 |||||||| || ||||||||||||||||| || || ||||| |||||||||||||||||| Sbjct 109 ATCCCGGATGCGATCACCCCGCACGAGGAAGCCGTCTACACGAACATCGCGTTCATGGAG 50 Query 156208 AGCGTGCACGCACGCAGCTACTCGAACATCTTCTCGACGCT 156248 |||||||| |||||||| ||||||||||| || Sbjct 49 TCGGTGCACGCCAAGAGCTACTCCTCGATCTTCTCGACCCT 9 Score = 122 bits (134), Expect = 9e-23 Identities = 97/117 (83%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 155935 GCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGACC 155994 || ||||||||||||||| | |||||||| |||||| ||||| |||||||| ||| Sbjct 360 GCGATCAACTGGAACCGCATCATCGACGACAAGGACCTCGAGGTCTGGAACCGTCTGGTG 301 Query 155995 AACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCAC 156051 ||||||||||||||||| |||||| | ||| |||| || ||| ||||||||||| || Sbjct 300 AACAACTTCTGGCTGCCCGAGAAGGTGCCGCTGTCGAACGACATCCAGTCGTGGAAC 244 >seq11715 Length=6190 Score = 86.0 bits (94), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 ||||||| ||||||| |||||||||| ||||||||||||||| |||||| ||||||||| Sbjct 66 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGCCGCAGGTTCAAAT 7 Query 92675 CC 92676 || Sbjct 6 CC 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526504586495040