Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq3307 98.7 8e-16 >seq3307 Length=24489 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118179 CCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATACTG 118238 ||||| || || || | ||| | ||||||||||| || || | ||||| ||||| ||| Sbjct 8886 CCGTCACGTCCAGCGCGACCTGTTTCTTGATAATATCCTTCGATAGATTTCGGCATGCTG 8827 Query 118239 TGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGTCGAA 118298 | ||| | || || ||||| |||||||| ||||| ||||| || || || ||||| | | Sbjct 8826 TAATGCACGACAAAACGCACATCGGGTTTGTCGATTCCCATGCCAAAAGCGATCGTAGCA 8767 Query 118299 CATATCACTCGGGTCTCGTTCGCCATCCATCTGTTCTGCACGGAAGTGCGGTTCTTGGGA 118358 ||||| | | | | ||| ||||| || | ||| |||||||| || | ||| Sbjct 8766 CATATTATTTGAACTTTGTTGTTAATCCAACTATGCTGGACGGAAGTACGCTCCTTATCC 8707 Query 118359 GTCATGCCGGCGTGATA 118375 | || || |||||||| Sbjct 8706 GACAATCCAGCGTGATA 8690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381706487496288