Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq6327 109 5e-19 seq13049 104 2e-17 seq7750 104 2e-17 seq12388 87.8 2e-12 seq10049 84.2 2e-11 >seq6327 Length=14581 Score = 109 bits (120), Expect = 5e-19 Identities = 193/278 (69%), Gaps = 5/278 (2%) Strand=Plus/Minus Query 153483 GGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCC 153542 ||||||| ||||| || ||||| ||||| ||||| || | || || || ||||| Sbjct 6617 GGATAGTAATTGCAGTCAATAATCTTGTTAAGGTTACGTGTGATAACCTTGGTAATCGCA 6558 Query 153543 TTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATA 153602 | ||| || ||| ||||| |||| | || || | |||||||| |||| ||||| Sbjct 6557 TGAAGCTTTTCGTAATCAAAGGTTTTGTCTTCTTTG---ACGCATCGGTTCAGAGCAATC 6501 Query 153603 GACGCCAGATTACAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATCTCGGCGCA 153661 || || | ||| || || || || || || | || |||||||||||| || | ||| Sbjct 6500 GAAGCTAAATTGCAAACAGCGACTTCATCAGGAGACGA-GTACTGCACGATTTCAGTGCA 6442 Query 153662 GAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTC 153721 ||| ||| ||||| || || | ||||| ||| || || | |||||| || || Sbjct 6441 GAGATTGGAACATTTAATAGTTCCAAGATTTTTCTGGTTCGACTTTCTATTGCAAGCATC 6382 Query 153722 TTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCG 153759 |||| |||||||||| ||| || || || | ||||| Sbjct 6381 TTTGTAGAGCATGTAAGGTGTACCAGTTTCAATTTGCG 6344 Score = 100 bits (110), Expect = 3e-16 Identities = 191/278 (69%), Gaps = 5/278 (2%) Strand=Plus/Minus Query 153483 GGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCC 153542 |||||| ||||| |||||||||||||| ||||| || || || || || || || Sbjct 7106 GGATAGAAATTGCAGTCGATAATTTTGTTAAGGTTACGTGTGACAACCTTGGTAATTGCA 7047 Query 153543 TTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATA 153602 | ||| || ||| ||||| | || | || || | ||| |||| |||| ||||| Sbjct 7046 TGAAGCTTTTCGTAATCAAAAGTTTTGTCTTCTTTG---ACGAATCGGTTCAGAGCAATC 6990 Query 153603 GACGCCAGATTACAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATCTCGGCGCA 153661 || || | ||| || || || || || || | || |||||||||||| || | || Sbjct 6989 GAAGCTAAATTGCAAACAGCGACTTCATCAGGAGACGA-GTACTGCACGATTTCCGTACA 6931 Query 153662 GAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTC 153721 ||| ||| || || || || | ||||| |||||| || | |||||| || || Sbjct 6930 GAGATTGGAACACTTAATAGTTCCAAGATTTTTCTGATTCGACTTTCTATTGCAAGCATC 6871 Query 153722 TTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCG 153759 |||| | |||||||||||| || || || | ||||| Sbjct 6870 TTTGTAAAGCATGTACGGTATACCAGTTTCAATTTGCG 6833 >seq13049 Length=11502 Score = 104 bits (114), Expect = 2e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || ||||| |||||||||||| || || || ||| || |||||||| || | | Sbjct 10047 GATTCTTTTTGGATGTTGTAGTCGGACAAGGTGCGGCCGTCTTCAAGTTGTTTGCCAGCA 9988 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| ||||| || ||||| ||||| | ||||||||||| |||||| ||| | Sbjct 9987 AAGATAAGACGTTGCTGGTCTGGAGGGGTTCCTTCTTTGTCCTGGATTTTAGCTTTGACG 9928 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | | |||| | | || || |||| || | |||||||||||| || || || Sbjct 9927 TTCTCAATGCTGTCTGAGGCTTCGACTTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTC 9868 Query 138601 ACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 9867 ACGAAGATCTGCATG 9853 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| | ||| | |||||||||| || |||||||| || Sbjct 7420 CCACCACGAAGACGGAGAACGAGATGGAGTGTTGACTCCTTCTGGATGTTGTAATCAGAG 7361 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || |||||||| || | | |||| ||||| || ||||| ||||| Sbjct 7360 AGGGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGAGGA 7301 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || |||||||| |||||| || | | ||| | | |||| | | || || Sbjct 7300 ATGCCCTCTTTGTCCTGGATTTTGGCCTTGACGTTTTCAATGCTGTCTGAGGCTTCGACT 7241 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| || | |||||||||||| || || || || || ||||||||| Sbjct 7240 TCGAGAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCATG 7193 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||| ||||||||||| || || || ||||| |||||||| |||| Sbjct 10503 GATTCCTTTTGTATGTTGTAGTCAGACAGGGTGCGGCCATCCTCAAGTTGTTTTCCGGCG 10444 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 |||| | |||||||| || ||||| || || |||||||| ||| | || | ||| | Sbjct 10443 AAGATCAATCGCTGTTGATCGGGAGGGATTCCCTCTTTGTC-CTGAATCTTGGCTTTGAC 10385 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | | |||| | | || || |||| || | |||||||||||| || || || Sbjct 10384 GTTCTCAATGCTGTCTGAGGCTTCGACTTCGAGAGTGATCGTTTTACCAGTGAGGGTCTT 10325 Query 138600 TACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 10324 CACGAAGATCTGCATG 10309 >seq7750 Length=8304 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | ||| | ||| | ||||||| |||||||||||||||||| Sbjct 2710 CCACCGCGCAGACGGAGAACAAGATGAAGAGTTGACTCTTTTTGAATGTTGTAGTCGGAG 2769 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||| || || || || |||| |||| | |||||||||||| || || Sbjct 2770 AGAGTACGGCCGTCTTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCTGGGGGA 2829 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || || | | || | ||||| | | || ||| Sbjct 2830 ATTCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTCTCGATTGTGTCAGAGGCTTCTACC 2889 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || ||||| ||||| || ||||| || ||||| Sbjct 2890 TCGAGGGTAATGGTCTTTCCAGTAAGAGTCTTCACAAAGATTTGCAT 2936 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| | ||| | | | |||||||| ||||||||||||||| Sbjct 767 CCACCACGAAGACGAAGAACGAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAG 826 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||| || || || || |||| |||| | || || || || ||||| Sbjct 827 AGAGTACGACCGTCTTCAAGCTGCTTTCCGGCGAAGATCAAGCGTTGCTGATCTGGAGGA 886 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| ||| || || | | ||| | ||||||| || || ||| Sbjct 887 ATTCCTTCTTTGTCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCGGACGCTTCGACC 946 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| || || || || || || || |||||||| Sbjct 947 TCAAGAGTGATGGTTTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 993 >seq12388 Length=21549 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| | ||| | | |||||||||| ||||| |||||||| | || || || || Sbjct 15490 AACGAGATGGAGGGTTGACTCCTTCTGAATATTGTAGTCAGATAGGGTGCGGCCATCTTC 15431 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 || || || |||| |||| ||||| || ||||| ||||| || ||||| ||||| Sbjct 15430 AAGCTGCTTCCCGGCGAAGATAAGACGTTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTG 15371 Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 |||||| || | | ||| | | || | | || || || | || | |||||| Sbjct 15370 GATTTTGGCCTTGACGTTTTCAATACTATCAGAGGCTTCGACTTCTAGGGTGATCGTTTT 15311 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||||| || || |||||||| ||||||||| Sbjct 15310 ACCAGTGAGGGTCTTTACAAAGATCTGCATG 15280 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||| ||||| || || || || || || || || || |||| Sbjct 15983 GATTCCTTCTGAATATTGTAATCAGACAGGGTGCGGCCATCTTCAAGCTGCTTTCCGGCG 15924 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| ||||||||||| || ||||| || || || ||||| |||||| ||| | Sbjct 15923 AAGATGAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGGATTTTGGCTTTGACG 15864 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | | |||| | | || || |||| || | |||||||||||||| || || Sbjct 15863 TTCTCAATGCTGTCTGAGGCTTCGACTTCGAGGGTGATCGTTTTACCAGTCAACGTCTTG 15804 Query 138601 ACAAAAATCTGCATG 138615 |||||||| |||||| Sbjct 15803 ACAAAAATTTGCATG 15789 >seq10049 Length=10599 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | ||| | || | | |||||||||| ||||| ||||||||| Sbjct 9171 GCCACCACGAAGACGGAGAACGAGGTGGAGGGTTGACTCCTTCTGAATATTGTAGTCGGA 9230 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | |||||| ||| || || || || |||| |||| | ||||| ||||| || || Sbjct 9231 AAGAGTACGACCGTCTTCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGCGG 9290 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | | || | | | || | | || || Sbjct 9291 GATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGCTATCAGAGGCTTCGAC 9350 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| || | ||||||||||| || || || || || ||||||||| Sbjct 9351 TTCGAGAGTGATGGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCATG 9399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496173990853440