Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq11290 120 8e-23 >seq11290 Length=3944 Score = 120 bits (132), Expect = 8e-23 Identities = 193/274 (70%), Gaps = 4/274 (1%) Strand=Plus/Minus Query 8834 GGGCCACCGAGGTCGCCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAACTCGACG 8893 ||| || ||| || ||| || || || | ||||| || ||||| || || || Sbjct 899 GGGTCAACGAAATCAGCGAGATTTCTCGATCGCTCAAGGGGATCGCGAAAGAGTTCAACT 840 Query 8894 TTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGC 8953 || |||| || || || ||||| ||||| | ||| ||| || || |||||||||| Sbjct 839 GCCCCTTCATGGCTCTCTCCCAGCTCAATCGCGAGCTGGAGCGCCGGCCCAACAAGCGGC 780 Query 8954 CCGTCATGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCT 9013 | |||| ||||||| ||||| ||||||||||||||||| || ||| | ||| | | Sbjct 779 CAGTCAATGCCGATCTACGCGATAGCGGTGCGATCGAGCAGGACGCGGACCTCATCATTT 720 Query 9014 TTATCTACCGCGATGAGGTCTATAACCCCGACAGCGCAGATCGCGGTACG--GCCGAAAT 9071 || ||||||| || ||||| || ||| |||| || || || || || || ||| | Sbjct 719 TTGTCTACCGGGACGAGGTTTACAACAAGGACACCG-AGCTCAAGG-GCGTCGCGGAACT 662 Query 9072 CATCATTGCGAAGCAGCGAAACGGGCCGATTGGC 9105 ||||||| ||||| || ||||| || ||||| Sbjct 661 GATCATTGGCAAGCACCGCAACGGTCCCGTTGGC 628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127524013863792