Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq7750 143 6e-29 seq13049 129 1e-24 seq12388 129 1e-24 seq10049 118 2e-21 seq8226 109 1e-18 seq11914 93.3 1e-13 seq10950 89.7 1e-12 >seq7750 Length=8304 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || ||||| ||||| ||||| | ||||||||| | | ||| | || ||| Sbjct 2725 AGAACAAGATGAAGAGTTGACTCTTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCT 2784 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||||||||| | |||||| ||||| || ||||||||| ||| Sbjct 2785 TCAAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCTGGGGGAATTCCTTCCTTGTCC 2844 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||||| | | |||||| || | || || ||| Sbjct 2845 TGGATCTTGGCCTTAACGTTCTCGATTGTGTCAGAGGCTTCTACCTCGAGGGTAATGGTC 2904 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| |||||||| ||||| Sbjct 2905 TTTCCAGTAAGAGTCTTCACAAAGATTTG 2933 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || || || ||||||||||| |||| ||||||||||| | ||| | |||||| Sbjct 1010 AGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATCT 1069 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||||||||| | || ||||| || ||| ||||||||| ||| Sbjct 1070 TCGAGCTGCTTTCCGGCGAAGATCAACCGTTGCTGATCTGGAGGAATTCCTTCCTTATCC 1129 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || ||||| ||||| | | ||| || || | ||||| || Sbjct 1130 TGGATCTTGGCCTTGACATTTTCGATTGTGTCGGACGCTTCGACCTCAAGAGTGATGGTT 1189 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 1190 TTTCCGGTGAGTGTCTTGACGAAGATCTG 1218 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || || || || ||||||||||| || | ||||||||| | | ||| Sbjct 773 CGAAGACGAAGAACGAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTA 832 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| |||||||||||||||||||| | || ||||| || ||| ||||||| Sbjct 833 CGACCGTCTTCAAGCTGCTTTCCGGCGAAGATCAAGCGTTGCTGATCTGGAGGAATTCCT 892 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| ||||| ||||| ||| || ||||| ||||| | | ||| || || | Sbjct 893 TCTTTGTCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCGGACGCTTCGACCTCAAGA 952 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || ||||| || || || || || || Sbjct 953 GTGATGGTTTTTCCGGTGAGTGTCTTGACGAAGATCTG 990 Score = 102 bits (112), Expect = 2e-16 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || |||||||| || | |||||| || | | || | || || || || ||||||||| Sbjct 1527 GTGGACTCCTTCTGAATGTTGTAATCGGAGAGTGTACGACCGTCCTCGAGTTGCTTTCCG 1586 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 |||||||| | |||||||| || || ||||||||| ||||| ||||| ||| Sbjct 1587 GCGAAGATCAAGCGCTGCTGATCTGGCGGAATTCCTTCCTTATCCTGGATCTTGGCCTTG 1646 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| |||| ||||| | || ||| || |||| ||||| ||||| || ||||| || Sbjct 1647 ACGTTCTCGATAGTGTCGGATGCTTCAACTTCCAGAGTGATTGTCTTTCCGGTGAGGGTC 1706 Query 199613 TTCACAAAAATTTG 199626 || || || || || Sbjct 1707 TTAACGAAGATCTG 1720 >seq13049 Length=11502 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| |||||||| |||||||| | ||||||||||| || || | ||||| Sbjct 10521 AGGACCAAGTGCAGAGTCGATTCCTTTTGTATGTTGTAGTCAGACAGGGTGCGGCCATCC 10462 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || || |||||||||||||| | ||||| || || ||| ||||| ||| ||| Sbjct 10461 TCAAGTTGTTTTCCGGCGAAGATCAATCGCTGTTGATCGGGAGGGATTCCCTCTTTGTCC 10402 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| || ||| || | | |||||| | ||| || || | |||||||| Sbjct 10401 TGAATCTTGGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTCGAGAGTGATCGTT 10342 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || || || Sbjct 10341 TTACCAGTGAGGGTCTTCACGAAGATCTG 10313 Score = 104 bits (114), Expect = 6e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || || ||||| || |||||||| |||| |||||| |||| | || Sbjct 10302 CGAAGACGGAGAACGAGATGGAGTGTTGACTCCTTCTGGATGTTGTAATCAGAGAGGGTG 10243 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| ||||||||||| || ||||| ||||| |||||||| || |||||| Sbjct 10242 CGGCCATCTTCAAGCTGCTTTCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGGATTCCT 10183 Query 199529 TCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || ||||| || ||| || || ||| || | | || | | ||| || || || Sbjct 10182 TCCTTGTCCTGGAT-TTTGGCTTTGACGTTCTCAATACTATCAGAGGCTTCGACTTCTAA 10124 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || ||||| || || Sbjct 10123 GGTAATTGTCTTGCCAGTAAGGGTCTTGACAAAGATCTG 10085 >seq12388 Length=21549 Score = 129 bits (142), Expect = 1e-24 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| |||||||| ||||| || | ||||| |||| || || | |||||| Sbjct 16001 AGAACCAAGTGAAGAGTCGATTCCTTCTGAATATTGTAATCAGACAGGGTGCGGCCATCT 15942 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||||||||||||||||||||| || || ||| ||||| || ||| Sbjct 15941 TCAAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCC 15882 Query 199538 TGAATCTTTTGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 || || ||| |||| ||| || | | |||||| | ||| || || | |||||||| Sbjct 15881 TGGAT-TTTGGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTCGAGGGTGATCGT 15823 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || | || || ||||||||||| Sbjct 15822 TTTACCAGTCAACGTCTTGACAAAAATTTG 15793 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 199421 ACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCC 199480 || || ||||| || |||||||| || | |||||||||| | || | |||||||| Sbjct 15489 ACGAGATGGAGGGTTGACTCCTTCTGAATATTGTAGTCAGATAGGGTGCGGCCATCTTCA 15430 Query 199481 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGA 199540 |||||||| ||||||||||| ||||| |||||||| ||| ||||||||| || || Sbjct 15429 AGCTGCTTCCCGGCGAAGATAAGACGTTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGG 15370 Query 199541 ATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTA 199600 || || ||| ||| ||| | | || | | ||| || || | |||||||| ||| Sbjct 15369 ATTTTGGCCTTGACGTTTTCAATACTATCAGAGGCTTCGACTTCTAGGGTGATCGTTTTA 15310 Query 199601 CCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || ||||| || || Sbjct 15309 CCAGTGAGGGTCTTTACAAAGATCTG 15284 >seq10049 Length=10599 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || |||||||| || |||||||| || | |||||||| | | ||| Sbjct 9178 CGAAGACGGAGAACGAGGTGGAGGGTTGACTCCTTCTGAATATTGTAGTCGGAAAGAGTA 9237 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| |||||||||||||||||||| | ||||||||||| || |||||| Sbjct 9238 CGACCGTCTTCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGCGGGATTCCT 9297 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| || | | | || | | ||| || || | Sbjct 9298 TCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGCTATCAGAGGCTTCGACTTCGAGA 9357 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| ||||| || ||||| || || || Sbjct 9358 GTGATGGTTTTACCAGTGAGGGTCTTCACGAAGATCTG 9395 >seq8226 Length=1064 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || || ||||| || |||||||| || | ||||| |||| | || Sbjct 792 CGAAGACGGAGAACGAGATGGAGGGTTGACTCCTTCTGAATATTGTAATCAGAAAGGGTG 851 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||| ||| |||||||||||||| | ||||||||||| || ||| || Sbjct 852 CGGCCATCTTCCAACTGTTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCC 911 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| ||| ||| | | | || | | ||| || || | Sbjct 912 TCCTTGTCCTGAATCTTGGCCTTGACGTTTTCAATGCTATCAGAGGCTTCGACTTCGAGA 971 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| || | || || ||||| ||||| Sbjct 972 GTGATTGTTTTACCAGTCAACGTCTTGACAAAGATTTG 1009 Score = 95.1 bits (104), Expect = 3e-14 Identities = 127/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 199450 GTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTG 199509 ||||||||| | ||| || | || || || || || ||||| |||||||| | ||||| Sbjct 605 GTTGTAGTCGGACAAGGTGCGGCCGTCCTCAAGTTGTTTTCCAGCGAAGATCAATCGCTG 664 Query 199510 CTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569 |||||| ||| || ||||| || |||||||| ||| || ||| | | |||| Sbjct 665 CTGGTCTGGAGGGATACCTTCCTTGTCTTGAATCTTGGCCTTGACATTTTCAATGCTGTC 724 Query 199570 TGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || | ||| || || || || || ||||| || || || || || ||||||||||| Sbjct 725 TGAGGCTTCGACTTCTAAGGTAATTGTCTTGCCAGTAAGGGTCTTGACAAAAATTTG 781 >seq11914 Length=36757 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| |||||||||||||| ||||||||||| ||| |||||||| ||||| ||||| Sbjct 2906 CTTACCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATTCCTTCCTTGTCCTGGATCTT 2965 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 |||||| |||| |||||| | | || || || | ||||| ||||||||||| Sbjct 2966 GGCCTTCACATTCTCGATGGTGTCCGAAGCCTCGACCTCGAGGGTGATTGTCTTACCCGT 3025 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || Sbjct 3026 TAGGGTTTTGACGAATATCTG 3046 >seq10950 Length=25243 Score = 89.7 bits (98), Expect = 1e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || |||| || || | ||||| ||||| |||||||||| ||||||||| | ||| || Sbjct 24764 CGGAGTCGGAGAACCAAATGGAGGGTCGATTCCTTTTGGATGTTGTAGTCGGACAAGGTG 24823 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGC 199507 | || || |||| ||| ||||||||||||||||||||| Sbjct 24824 CGGCCGTCCTCCAACTGTTTTCCGGCGAAGATGAGACGC 24862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178706324494884