Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq13049 145 8e-30 seq7750 116 4e-21 seq10049 105 7e-18 seq1186 91.5 1e-13 seq10950 87.8 2e-12 seq8226 82.4 8e-11 >seq13049 Length=11502 Score = 145 bits (160), Expect = 8e-30 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || ||||| ||||| |||| ||||| ||| | Sbjct 10310 ATGCAGATCTTCGTGAAGACCCTCACTGGTAAAACGATCACTCTCGAAGTCGAAGCCTCA 10369 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||||| | | |||| | |||| || || | |||||||||||||| || |||| || Sbjct 10370 GACAGCATTGAGAACG-TCAAAGCCAAGATTCAGGACAAAGAGGGAATCCCTCCCGATCA 10428 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | ||| || ||||| || || || | |||||||| |||||||| Sbjct 10429 ACAGCGATTGATCTTCGCCGGAAAACAACTTGAGGATGGCCGCACCCTGTCTGACTACAA 10488 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| ||||||||| |||| ||||| ||||| || ||| Sbjct 10489 CATACAAAAGGAATCGACTCTGCACTTGGTCCTCCGT 10525 Score = 141 bits (156), Expect = 9e-29 Identities = 165/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || ||||| || ||||| ||||| |||| ||||| ||| Sbjct 9851 AACATGCAGATCTTCGTGAAGACCCTCACTGGTAAAACGATCACTCTCGAAGTCGAAGCC 9910 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||||| | | |||| | |||| ||||||| |||||||| |||| || | || Sbjct 9911 TCAGACAGCATTGAGAACG-TCAAAGCTAAAATCCAGGACAAAGAAGGAACCCCTCCAGA 9969 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| || || || || | || |||||||| || || |||| |||||| | |||||| Sbjct 9970 CCAGCAACGTCTTATCTTTGCTGGCAAACAACTTGAAGACGGCCGCACCTTGTCCGACTA 10029 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||| ||| |||| || || ||||| || ||| Sbjct 10030 CAACATCCAAAAAGAATCGACTCTTCACTTGGTCCTCCGT 10069 Score = 132 bits (146), Expect = 5e-26 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || ||||| || ||||| ||||| |||| ||||| ||| Sbjct 7191 AACATGCAGATCTTCGTGAAGACCCTCACTGGTAAAACGATCACTCTCGAAGTCGAAGCC 7250 Query 38301 ACCGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||||| | | ||||| | || | ||||||| ||||||||||| ||||| | || Sbjct 7251 TCAGACAGCATTGAAAACG-TCAAGGCCAAAATCCAGGACAAAGAGGGCATTCCTCCAGA 7309 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| || || || || | || |||||||| || || || | ||||||||| || || Sbjct 7310 CCAGCAACGTCTTATCTTTGCTGGCAAACAACTTGAAGATGGCCGCACCCTCTCTGATTA 7369 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||| ||||| | || || ||| | || || ||| Sbjct 7370 CAACATCCAGAAGGAGTCAACACTCCATCTCGTTCTCCGT 7409 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| || || ||| | || ||||| ||| | Sbjct 10082 ATGCAGATCTTTGTCAAGACCCTTACTGGCAAGACAATTACCTTAGAAGTCGAAGCCTCT 10141 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || || | | |||| | |||| ||||||| ||||| || ||||| ||| | ||||| Sbjct 10142 GATAGTATTGAGAACG-TCAAAGCCAAAATCCAGGACAAGGAAGGAATCCCCCCAGACCA 10200 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || || || | || || || ||||| || || | ||||||||| || ||||| Sbjct 10201 GCAACGTCTTATCTTTGCTGGAAAGCAGCTTGAAGATGGCCGCACCCTCTCTGATTACAA 10260 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | || || ||| | || || ||| Sbjct 10261 CATCCAGAAGGAGTCAACACTCCATCTCGTTCTCCGT 10297 >seq7750 Length=8304 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || || || ||||| ||| |||| || || ||| | Sbjct 2936 ATGCAAATCTTTGTGAAGACTCTTACTGGAAAGACCATTACCCTCGAGGTAGAAGCCTCT 2877 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| | || |||| ||||| || ||||||||| | ||||| Sbjct 2876 GACACAATCGAGAACG-TTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCA 2818 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | ||| || || ||||| || |||| || || ||| ||||||||| Sbjct 2817 ACAGCGTTTGATCTTCGCCGGAAAGCAGCTTGAAGACGGCCGTACTCTCTCCGACTACAA 2758 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| ||||| || | || || ||| | || || ||| || | || || Sbjct 2757 CATTCAAAAAGAGTCAACTCTTCATCTTGTTCTCCGTCTGCGCGGTGG 2710 Score = 113 bits (124), Expect = 5e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || ||||| || ||||||||||| | || ||||| || | Sbjct 994 AATGCAGATCTTCGTCAAGACACTCACCGGAAAAACCATCACTCTTGAGGTCGAAGCGTC 935 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||||| | ||| | || | || |||| |||||||| |||||||| | || || Sbjct 934 CGACACAATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGAATTCCTCCAGATCA 875 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || | || | ||| || || ||||| || |||| || || ||| ||||||||| Sbjct 874 GCAACGCTTGATCTTCGCCGGAAAGCAGCTTGAAGACGGTCGTACTCTCTCCGACTACAA 815 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| |||| || ||| | || || ||| Sbjct 814 CATTCAGAAGGAGTCGACCCTTCATCTCGTTCTTCGT 778 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || ||||| || ||||||||||| | || ||||| || | Sbjct 1222 AATGCAGATCTTCGTCAAGACACTCACCGGAAAAACCATCACTCTTGAGGTCGAAGCGTC 1163 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||||| | ||| | || | || |||| || || || |||||||| | || || Sbjct 1162 CGACACAATCGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCAGATCA 1103 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || ||| | || | ||| || || ||||| || || | |||||| || |||||||| Sbjct 1102 GCAACGGTTGATCTTCGCCGGAAAGCAGCTCGAAGATGGGCGCACTCTTTCTGACTACAA 1043 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| |||| || ||| | || || || Sbjct 1042 CATCCAGAAGGAGTCGACCCTTCATCTCGTTCTCCG 1007 >seq10049 Length=10599 Score = 105 bits (116), Expect = 7e-18 Identities = 144/196 (73%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || ||||| || ||||||||||| |||| ||||| ||| Sbjct 9401 AACATGCAGATCTTCGTGAAGACCCTCACTGGTAAAACCATCACTCTCGAAGTCGAAGCC 9342 Query 38301 ACCGACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-G 38358 | || ||| || |||| | || | || |||| ||||| || |||| ||||||| | Sbjct 9341 TCTGATAGCATTGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGAA-TCCCGCCAG 9284 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||| | || | ||| || || ||||| || |||| || || || ||||| Sbjct 9283 ACCAGCAGCGATTGATCTTCGCCGGAAAGCAGCTTGAAGACGGTCGTACTCTTTCCGACT 9224 Query 38419 ACAACATCCAAAAGGA 38434 |||| || || ||||| Sbjct 9223 ACAATATTCAGAAGGA 9208 >seq1186 Length=9182 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| |||||||| ||||| ||||||||||| || || || |||| |||||||| || Sbjct 3325 ATGCAGATATTCGTCAAAACTCTCACGGGCAAGACAATTACGCTCGAAGTCGAGGCGTCC 3266 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | ||| | || | ||||||| ||||| ||||| ||||| | || ||| Sbjct 3265 GACACCATCGAAAATGTGAAGGCCAAAATCCAGGACAAGGAGGGCATTCCGCCTGATCAA 3206 Query 38364 CAGCGGCTCATTTACGCGGGCAA 38386 || || || || | ||| || || Sbjct 3205 CAACGTCTTATCTTCGCTGGTAA 3183 >seq10950 Length=25243 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 38366 GCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACAT 38425 ||| ||||| | ||| || |||||| |||| |||| |||||| | |||||||||||| Sbjct 24862 GCGTCTCATCTTCGCCGGAAAACAGTTGGAGGACGGCCGCACCTTGTCCGACTACAACAT 24803 Query 38426 CCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||||| |||| || |||||||| || || Sbjct 24802 CCAAAAGGAATCGACCCTCCATTTGGTTCTCCG 24770 >seq8226 Length=1064 Score = 82.4 bits (90), Expect = 8e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || ||||| || || ||| | || ||||| ||| | Sbjct 784 ATGCAAATTTTTGTCAAGACCCTTACTGGCAAGACAATTACCTTAGAAGTCGAAGCCTCA 725 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||||| | ||| | || | || || | ||||| || || || || | ||||| Sbjct 724 GACAGCATTGAAAATGTCAAGGCCAAGATTCAAGACAAGGAAGGTATCCCTCCAGACCAG 665 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || ||||| || || |||| |||||| | |||||||||| Sbjct 664 CAGCGATTGATCTTCGCTGGAAAACAACTTGAGGACGGCCGCACCTTGTCCGACTACAAC 605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500083694215680