Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq6327 156 5e-33 >seq6327 Length=14581 Score = 156 bits (172), Expect = 5e-33 Identities = 463/710 (65%), Gaps = 27/710 (4%) Strand=Plus/Plus Query 112299 CAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAAT 112358 |||| || ||||||| ||| || |||||||||||||| || || || |||| ||| Sbjct 6835 CAAATTGAAACTGGTATACCGTACATGCTTTACAAAGATGCTTGCAATAGAAAGTCGAAT 6894 Query 112359 CAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACA 112418 || || ||| | || || ||| ||||||| |||||||| |||||| || | | | Sbjct 6895 CAGAAAAATCTTGGAACTATTAAGTGTTCCAATCTCTGTACGGAAATCGTGCAGTACTCG 6954 Query 112419 GACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGAT 112478 ||||| ||||| || || | || || || ||||| | | || | Sbjct 6955 TCTCCTGATGAAGTCGCTGTTTGCAATTTAGCTTCGATTGCTCTGAACCGATTCGTCAA- 7013 Query 112479 CCAGA-GACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAA 112537 ||| |||||| || |||||||| ||||| || || | | |||| || ||||||| Sbjct 7014 --AGAAGACAAA-ACTTTTGATTACGAAAAGCTTCATGCAATTACCAAGGTTGTCACACG 7070 Query 112538 AAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAA 112597 ||||| |||| | |||| || | ||||| || || ||| ||| | ||| || Sbjct 7071 TAACCTTAACAAAATTATCGACTGCAATTTCTATCCGGTTCCCGAAGCTGAAACATCAAA 7130 Query 112598 TATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTG 112657 | | | || || |||||||| |||| || |||||| | || |||| ||||| | Sbjct 7131 CAAGCGTCATCGCCCAATTGGAATCGGAGTTCAAGGTTTAGCAGATGCTTTCATGTTGAT 7190 Query 112658 TCGCCACGCATTTGAT--TCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACA 112715 || | | || | ||| |||| || |||| | | || ||||| || Sbjct 7191 GCGGTATCCGTTCACTAGTCCTC--AAGCTCGTGATCTCAACAAGAGAATCTTTGAAACC 7248 Query 112716 ATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAA 112775 || || || | ||||||||||| || || || || ||| ||||| | ||||| Sbjct 7249 ATTTACCATGGTGCTCTTGAGGCATCCTCTGAATTAGCTGAGAAATATGGTACTTATGAG 7308 Query 112776 ACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGG------GAA 112829 || | || || ||||| | ||||| | ||||||| ||| |||||| ||| Sbjct 7309 ACGTACGAAGGGTCTCCTGTAAGCCAAGGAATTCTTCAATATGAAATGTGGAATACAGAA 7368 Query 112830 GGTG-AGACCAAGCT-----------TCACTACGACTGGGACGCTCTCAAGGAACGCATC 112877 | || | | | || | ||| | | | |||| ||||| ||||| ||| Sbjct 7369 GATGGAAAGCCAGTTCTTCCTACAGATCAGTGCAATTGGGTAGCTCTGAAGGAGAAAATC 7428 Query 112878 AAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCA 112937 | || | || | |||||||||||| | | || ||||||||||| |||||||| || Sbjct 7429 GCGAAGCATGGAGTGCGTAACAGTCTTCTTCTCGCCCCAATGCCAACGGCCTCCACAGCT 7488 Query 112938 CAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 112987 |||||| | || || ||||||| |||| ||||||||| | |||||||| Sbjct 7489 CAAATCCTTGGAAACAATGAATCGATTGAGCCCTACACGTCCAACATCTA 7538 Score = 84.2 bits (92), Expect = 3e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 112893 CGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAAT 112952 |||||||||||| | | || ||||||||||| || ||||| || ||||| |||| || Sbjct 7973 CGTAACAGTCTTCTTCTCGCCCCAATGCCAACGGCTTCCACAGCTCAAATTCTGGGAAAC 8032 Query 112953 AATGAATGCTTTGAACCCTACACGACGAACATCTAT 112988 ||||||| | || ||||||||| | ||||||||| Sbjct 8033 AATGAATCGATCGAGCCCTACACGTCCAACATCTAT 8068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620631814741440