Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_014900.1 Length=40986 Score E Sequences producing significant alignments: (Bits) Value seq4764 203 8e-48 >seq4764 Length=15780 Score = 203 bits (224), Expect = 8e-48 Identities = 327/460 (71%), Gaps = 14/460 (3%) Strand=Plus/Plus Query 38049 TCATACAATGAGCAGCGAGAATGGTGTTTTGCATGTGATAGGCGTGTTCAATGGCAAACT 38108 || ||| |||| || || | ||||||| ||||| | || ||||| ||||||| |||| Sbjct 11108 TCGTACCGTGAGTAGTGAAAGTGGTGTTCTGCATATTATTGGCGTATTCAATGACAAAAA 11167 Query 38109 ATCTACTATTGCCCATGAGTGCGCTCACATGGCATTCGATATCTGCTCA-AGGGTCGGTG 38167 || || | || ||||| ||||| || | || ||||||||||| ||| | || |||| Sbjct 11168 CTCGACATTAGCTCATGAATGCGCCCATGTTGCTTTCGATATCTG-TCATCGTGTTGGTG 11226 Query 38168 TTGATGTTGAAT-CAGGAAGAGCCAACGAGACTTACTGCTACTTAATGAGCAGGCTTGTT 38226 | ||| ||| | |||| || || ||||| | |||||| | || ||||| | ||| Sbjct 11227 TGAATG-TGAGTACAGGTGAGGCAAATGAGACATTTTGCTACCTGATAAGCAGATTGGTT 11285 Query 38227 GAGTTCTGCGAGCGACATATCAAAAAGCCGGAGTGACCCGGCTTGATTATTACTT----T 38282 ||||| |||||| | ||||||||||||||||||||||||||| | | |||||| Sbjct 11286 GAGTTTTGCGAGAAGCCTATCAAAAAGCCGGAGTGACCCGGCTT-AGTTTTACTTACCGC 11344 Query 38283 TTGCTGTCTGGAGTTCGCTTATCTAATACCCAGCCATGACCTGGCTTTGTTGTTGGTGGA 38342 ||||| | ||||||| ||||| | | |||| | ||| | || | ||||||||| Sbjct 11345 TTGCTATTGGGAGTTCTTTTATCAAGTTCCCAAGTGTTACCGGATTTAGATGTTGGTGGC 11404 Query 38343 AGCCTTTCGTTGTCCTTGACGGTGGCAAAATTGTCTTTCTTACCGCCGCGCGGGCCAACT 38402 | ||||||| ||| | || ||||| ||||| || | || ||||| || || || ||| Sbjct 11405 AATTTTTCGTTATCCCTTACAGTGGCGAAATTATCAGTTTTGCCGCCACGAGGACCTACT 11464 Query 38403 TCTTGGTATATTCCGCCGTTTTTTCCTGTGTTTTCACCTGGTTTTTTCGCCATGATATAC 38462 || | || || ||||| | || || || ||||| || || || || |||| || | Sbjct 11465 TCACGATAGATACCGCCATCCTTACCAGTATTTTCTCCGGGCTTCTTACCCATAAT-GAT 11523 Query 38463 CTCAACA---TACACCCGTTATTGGGCGA-TTAAATATTG 38498 ||| | | | ||| || ||||| || | |||||||||| Sbjct 11524 CTCCATATTGTTCACTCGATATTGAGCCAGTTAAATATTG 11563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131011423545952