Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq11062 131 4e-26 seq4423 127 5e-25 >seq11062 Length=2017 Score = 131 bits (144), Expect = 4e-26 Identities = 178/246 (72%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 16296 GCGTTGGTCGTGGTGTTCCAGTTCACGAAATCCGGCCAGATCGTCATCAGCTCACGCTGG 16355 |||||||| |||||||||||||| ||| || ||||||||| ||| || || Sbjct 52 GCGTTGGTGGTGGTGTTCCAGTTTTGGAAGTCAGGCCAGATCACCATTGCTTCTCGTGCA 111 Query 16356 CCGAAGTTCGCGCGGTAGGTGGTCGCTTCCTCCTTCGTCTGTGC-GCCGAACGCGCTGAT 16414 ||||||||| ||||||||| | |||||||| || |||| ||| | | | ||||||| Sbjct 112 CCGAAGTTCTCGCGGTAGGCGACGGCTTCCTCTTTGGTCT-TGCTGTCCCAGGCGCTGAC 170 Query 16415 GTAGCCGAAGCCGCGCAGCTTCTGCGCGATCGTCGCAAGCTCGGACGCGACGGGCAGGGT 16474 |||| |||| | |||| || ||| |||||| | || ||| || || |||||| | Sbjct 171 ATAGCAGAAGGCCCGCAACTGCTGGCCGATCGAGACCAGGGCGGTGGCTACCGGCAGGCT 230 Query 16475 GTCGAGGCCTGGACAACCGAGCACGCGCGGCTTCACGCCGAGGCGGCTCTTCGCGGCGAG 16534 |||||||||||| || || | ||||||| || |||| ||| ||| |||||||| Sbjct 231 GTCGAGGCCTGGCACGCCAAGAATGCGCGGCACCAAACCGACACGGGCCTTGGCGGCGAG 290 Query 16535 CAGCGC 16540 || || Sbjct 291 GAGGGC 296 >seq4423 Length=667 Score = 127 bits (140), Expect = 5e-25 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 32546 TCCTCGGCACCAACGCGCGCACTGCGCAGAGCTACCACGGCAACCTGTATTTCGACGAGT 32605 |||| || |||||||| || || || ||| |||| ||||||||| | || |||||||| | Sbjct 1 TCCTGGGGACCAACGCCCGGACCGCCCAGGGCTATCACGGCAACTTCTACTTCGACGAAT 60 Query 32606 ACTTCTGGGTGCCGCGCTTCCAGGAGCTGCGCAAGGTCGCCTCCGGCATGGCGATTCACG 32665 ||||||| ||| |||| || |||||||||| |||||||||||| || Sbjct 61 TCTTCTGGACCTTCAAGTTCAAGGAACTCAACAAGGTCGCCAGCGGCATGGCGATGCAGA 120 Query 32666 ACCAGTGGCGGCAGACGTATTTCTCGACGCCGTCGAGCCTCGCGCACGACGCTTATCCGT 32725 | |||| || | ||| || ||||||||||| |||||| | || ||||| || || | | Sbjct 121 AGCAGTACCGCCGGACCTACTTCTCGACGCCATCGAGCATGGCACACGAGGCCTACACCT 180 Query 32726 TCTGGTCGGGCAAGCTGTTCAAC 32748 ||||| | ||| ||| |||||| Sbjct 181 TCTGGACCGGCGAGCGCTTCAAC 203 Score = 111 bits (122), Expect = 4e-20 Identities = 179/257 (70%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 32896 CTCTTCAATCTCGACCGGCTACGACTGGAATACAGCCCCGAGGAATACGCGAACCTGCTG 32955 || ||| | || ||| ||| | || || ||| | |||||| | | |||||||||| Sbjct 402 CTGTTCGACCTGGACGAGCTGAGGCTTGAGTACGACGCCGAGGCCTTCCAGAACCTGCTG 461 Query 32956 CTGTGCCAGTTCATCGACGATTCGCTGTCGGTTTTCCCGCTGACGGTGTTGCAGCCGTGC 33015 ||||||||||||||||||| | | | ||||| ||| || |||||||||| ||| Sbjct 462 ATGTGCCAGTTCATCGACGACGGGGCGAGCATCTTCCCCCTGGCGATGTTGCAGCCCTGC 521 Query 33016 ATGGTCGATACCTGGGAGGTGTGG---GACGACTTCAAGCCACTGTACCTGCGCCCGTTC 33072 ||||| || | ||||| | ||| || |||| ||| || | | || |||||| Sbjct 522 ATGGTGGACAGTTGGGACCTCTGGGCAGAGGACTACAAACCCTTCGCCGCACGGCCGTTC 581 Query 33073 GGCGACGAGGAGGTCTGGATCGGCTACGACCCGTCGCATACGGGCGACAGCGCCGGCTGC 33132 || || |||||||| | ||||| |||||| || | | ||||||||||| ||| Sbjct 582 GGTGATCGCCAGGTCTGGGTGGGCTATGACCCGGCGGAAAACGGCGACAGCGCGGGCATG 641 Query 33133 GTGGTGATTGCGCCGCC 33149 ||||| || || || || Sbjct 642 GTGGTAATCGCTCCCCC 658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119013454455952