Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq4423 104 6e-18 seq11062 87.8 5e-13 >seq4423 Length=667 Score = 104 bits (114), Expect = 6e-18 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 29114 TCCTAGGGACGAACTCGCGCACCGCGCAGTCGTATCACGGCAATCTGTACTTCGACGAAT 29173 |||| ||||| ||| | || ||||| ||| ||||||||||| | ||||||||||||| Sbjct 1 TCCTGGGGACCAACGCCCGGACCGCCCAGGGCTATCACGGCAACTTCTACTTCGACGAAT 60 Query 29174 ATTTCTGGGTGCCGAAGTTCCGCGAGCTGAATACCGTTGCGTCGGGCATGGCGATGCACA 29233 |||||| |||||| || || || | || || |||||||||||||| | Sbjct 61 TCTTCTGGACCTTCAAGTTCAAGGAACTCAACAAGGTCGCCAGCGGCATGGCGATGCAGA 120 Query 29234 AACGCTGGCGGCTGACCTACTTCAGCACGCCGTCGAGTACGACCCATGAAGCCTACGCGT 29293 | | | || | |||||||||| ||||| ||||| | | | || || |||||| | | Sbjct 121 AGCAGTACCGCCGGACCTACTTCTCGACGCCATCGAGCATGGCACACGAGGCCTACACCT 180 Query 29294 TCTGGAGCGGCG 29305 |||||| ||||| Sbjct 181 TCTGGACCGGCG 192 Score = 104 bits (114), Expect = 6e-18 Identities = 158/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 29440 GGCTGCGACTTGTTCGACCTGGA-GAGACTTCGGCGCCGGTACAGTGCAGAGGCTTTCGC 29498 ||||| || ||||||||||||| ||| || ||| |||| || ||||| ||| Sbjct 393 GGCTGTGATCTGTTCGACCTGGACGAG-CTGAGGCTTGAGTACGACGCCGAGGCCTTCCA 451 Query 29499 GAACCTGCTGATGTGCCAGTTCATCGACGATTCGGTGTCGGTGTTCAAGCTGGCCGAGCT 29558 |||||||||||||||||||||||||||||| || | | ||| ||||| | | Sbjct 452 GAACCTGCTGATGTGCCAGTTCATCGACGACGGGGCGAGCATCTTCCCCCTGGCGATGTT 511 Query 29559 GCAGCGCTGCATGGTCGACTCGTGGGAGGAATGGGCCGACGACTTCTCGCNNNNNNNNNN 29618 ||||| ||||||||| ||| ||||| ||||| || |||| | | Sbjct 512 GCAGCCCTGCATGGTGGACAGTTGGGACCTCTGGGCAGAGGACTACAAACCCTTCGCCGC 571 Query 29619 NCGTCCGTTCGGCTATCGCGAGGTGTGGGTTGGCTACGATCCGGCG 29664 || |||||||| ||||| |||| ||||| ||||| || |||||| Sbjct 572 ACGGCCGTTCGGTGATCGCCAGGTCTGGGTGGGCTATGACCCGGCG 617 >seq11062 Length=2017 Score = 87.8 bits (96), Expect = 5e-13 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 15015 GACGCGCACGACGACGGTGACGGGCTTCGTCTGCTTGCCGATCGCGTCGAGCGTGCGGCG 15074 ||| || || |||| | | |||||| ||||| | | |||| || | ||| || || Sbjct 476 GACCCGTACAACGATGACGTAGGGCTTGGTCTGGTCGGCGATGGCCTGGAGACTGGCGCC 535 Query 15075 CAGCGTGCCCTTCGTGCCGGCCTTGCCAAGCGCCGCGATGACGTTCGTCAGCAGCACCGG 15134 ||| |||||||| |||||||| || || | ||| | ||||| |||||||| ||||| Sbjct 536 CAGGGTGCCCTTGGTGCCGGCTTTACCGACCGCGGTCTGAACGTTGGTCAGCAGGACCGG 595 Query 15135 CGTGTCGAGCGGGAACGTCGCCGGGTCGGCG 15165 || ||||||||||| | | ||| |||||| Sbjct 596 GGTATCGAGCGGGAATGCCAGCGGATCGGCG 626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129632456965208