Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_015273.1 Length=32317 Score E Sequences producing significant alignments: (Bits) Value seq4423 125 1e-24 seq7043 109 1e-19 seq10415 80.6 6e-11 >seq4423 Length=667 Score = 125 bits (138), Expect = 1e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25444 TCCTCGGCACGAATTCGCGAACGGCGCAGAGCTATCACGGCAATTTCTATTTCGACGAGT 25503 |||| || || || | || || || ||| ||||||||||||| ||||| |||||||| | Sbjct 1 TCCTGGGGACCAACGCCCGGACCGCCCAGGGCTATCACGGCAACTTCTACTTCGACGAAT 60 Query 25504 ATTTTTGGGTGAGCGGGTTTCGCCAGCTCAACAAGGTTGCATCGGGCATGGCGATGCACA 25563 || ||| | ||| | ||||||||||| || |||||||||||||| | Sbjct 61 TCTTCTGGACCTTCAAGTTCAAGGAACTCAACAAGGTCGCCAGCGGCATGGCGATGCAGA 120 Query 25564 AGAAATGGCGAAAGACGTATTTTTCAACGCCGTCGAGCATCACGCACGAGGCTTACACCT 25623 || | | || ||| || || || ||||| |||||||| | |||||||| ||||||| Sbjct 121 AGCAGTACCGCCGGACCTACTTCTCGACGCCATCGAGCATGGCACACGAGGCCTACACCT 180 Query 25624 TCTGGAGTGGCGAGCACTACAACAGGGGC 25652 |||||| ||||||| || ||||| |||| Sbjct 181 TCTGGACCGGCGAGCGCTTCAACAAGGGC 209 >seq7043 Length=1122 Score = 109 bits (120), Expect = 1e-19 Identities = 170/238 (71%), Gaps = 14/238 (6%) Strand=Plus/Plus Query 8908 CCTTGCGTGATGAACCCGCCCAGCTCGCCGAATACGCGCGACGGGCTATGAATGCCGAGC 8967 |||| | || |||| ||||| || ||| | || || ||||| ||||| || || ||||| Sbjct 9 CCTTCCATGGTGAAACCGCCGAGTTCGGCAAACACCCGCGATGGGCTGTGGATATCGAGC 68 Query 8968 TTTTCCTTGAACCATCCGACCGTGCTTGATGCGACGTTC---GTGATCGCCGCTTGAACA 9024 |||||||||||||| || | || |||| || || || ||||| | | ||| || Sbjct 69 TTTTCCTTGAACCAACCAA---TGGTTGAGTCGCCGATCGCGGTGATGGTCTCTTTCACC 125 Query 9025 GCGCCGAGGCC-GCTAGTGATGCCATTCACGAGGCC---GGCGATCATGTTCGAGCCGAA 9080 ||| | ||| || || || ||||||||| ||||| | |||||||||| |||||| Sbjct 126 TTGCCCATGCCGGCGAG-GAGGCCATTCACCAGGCCATTGACGATCATGTT---GCCGAA 181 Query 9081 TTCGGAAAACTTCGACGGCATATCGATGCCGAACCATTGCAGCACGGCCGCGAAAGCC 9138 |||| ||||| | ||| | ||||| ||| | | | |||||| | ||||| ||| Sbjct 182 CTCGGTGAACTTGGTCGGGAGATCGAGGCCCAGGTAGTTCAGCACTTCGGCGAATGCC 239 >seq10415 Length=2169 Score = 80.6 bits (88), Expect = 6e-11 Identities = 103/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 23242 CGCGATCCTTCTGCGTCGTGTCGGTCGTGCTCGCGATCGGCGAGCCGACGCCGAGGCCGA 23301 |||| ||||| || |||||||| ||||| || || | | | ||| ||||| ||||| Sbjct 1035 CGCGGTCCTTGACGGTGGTGTCGGTGGTGCTGGCAATGGTCCCGTCGATGCCGATGCCGA 1094 Query 23302 GCTTTGCGCCTTCCTTGTCGGTCACGCCGATAACGTTGATGCGTTTCAGAAAGTCGCTCG 23361 ||| |||| || |||| |||||| |||||||||| | || || |||| | Sbjct 1095 TCTTCTCGCCCGACTGTTCGGAGACGCCGTAAACGTTGATGGCGCTGAGGAACGCGCTGG 1154 Query 23362 ATTCCTGAATGCGGGTTTCGAG 23383 | ||||||||||||||||| || Sbjct 1155 ACTCCTGAATGCGGGTTTCCAG 1176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103275318468296