Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq8273 217 2e-51 >seq8273 Length=3386 Score = 217 bits (240), Expect = 2e-51 Identities = 367/527 (70%), Gaps = 6/527 (1%) Strand=Plus/Minus Query 154590 TGGTTATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAG 154649 ||||||| || |||||||| |||| | || || || || || ||||| | || Sbjct 1496 TGGTTATCAGAGATCACAGGTTTTGCTAAAATGAGCTTCCAGCCAAATTCAGGAGCGCAA 1437 Query 154650 GGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAA 154709 ||||| |||||||| || | | |||| || || ||| | | || ||| || Sbjct 1436 GGTGAATATGCAGGTCTAATGGTTATCCGTGCTTATCATGAGAGCCGCGGCGATCATGGC 1377 Query 154710 AGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATG 154769 | || | |||||||| |||| || ||||| || || || ||||| ||| ||| Sbjct 1376 CGTAACATCTGTTTGATTCCAGCTTCTGCACACGGTACAAACCCTGCATCAGCTTCAATG 1317 Query 154770 GCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGAT 154829 || || ||||||| || | || || |||||||| ||| || || || ||| |||| Sbjct 1316 GCTGGTCTGAAAGTGGTGGTAGTGAAATGTGATGAACTTGGAAATATTGATATCCCAGAT 1257 Query 154830 CTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACCCA 154889 || | |||||| | || | | | ||| | | | ||| | || |||||| Sbjct 1256 TTAAGGTCAAAAGCAGAAGAGCATGCTGCTCACCTGAACTCTTTAATGGTAACTTACCCA 1197 Query 154890 TCTACACATGGTGTATTTGA---AACTAACATTAGACAGATATGTAAGATCGTTCATGAC 154946 |||||||||||||||||||| | ||| |||| || || | ||| | ||| |||| | | Sbjct 1196 TCTACACATGGTGTATTTGAGGAATCTATCATT-GA-AGTT-TGTGAAATCATTCACGCC 1140 Query 154947 AATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAA 155006 |||||||||||||||||| | ||||||||||| | |||||||||||||| | | | Sbjct 1139 AATGGTGGTCAGGTATATATGGATGGAGCAAACATGAATGCACAGGTAGGTTTGACTAGT 1080 Query 155007 CCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCA 155066 || | | |||||| || || || || ||||||| |||||||| |||||||||||| Sbjct 1079 CCGGGCCATATTGGTGCTGACGTTTGCCACTTAAACTTGCATAAAACGTTCTGTATTCCA 1020 Query 155067 CATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAAACA 155113 ||||| ||||| ||||| || | || || || ||||| || ||||| Sbjct 1019 CATGGTGGTGGTGGTCCAGGTATGGGGCCGATCGGTGTTGCTAAACA 973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579109613239680