Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq10049 111 1e-19 seq8226 111 1e-19 seq12388 107 1e-18 seq7750 102 5e-17 seq13049 98.7 6e-16 >seq10049 Length=10599 Score = 111 bits (122), Expect = 1e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || |||||||| || ||||| ||||| | || | || || ||||| |||||||| || Sbjct 9208 TCCTTCTGAATATTGTAGTCGGAAAGAGTACGACCGTCTTCAAGCTGCTTTCCGGCGAAG 9267 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | ||| ||||||||| |||| | || |||||||| ||||| |||||| Sbjct 9268 ATCAATCGCTGCTGGTCTGGCGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTC 9327 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || ||| ||| || || |||| || |||||||| || ||||| |||||||| Sbjct 9328 TCAATGCTATCAGAGGCTTCGACTTCGAGAGTGATGGTTTTACCAGTGAGGGTCTTCACG 9387 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 9388 AAGATCTGCATGTT 9401 >seq8226 Length=1064 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || |||||||| || || || |||||| | || |||| |||| |||||||||||| || Sbjct 822 TCCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCTTCCAACTGTTTTCCGGCGAAG 881 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | ||| ||||||||| | || | ||||||||||| |||||| |||||| | Sbjct 882 ATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTT 941 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || ||| ||| || || |||| || || ||||| || || | ||||| ||| Sbjct 942 TCAATGCTATCAGAGGCTTCGACTTCGAGAGTGATTGTTTTACCAGTCAACGTCTTGACA 1001 Query 34971 AAGATCTGCAT 34981 ||||| ||||| Sbjct 1002 AAGATTTGCAT 1012 >seq12388 Length=21549 Score = 107 bits (118), Expect = 1e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || |||||||| || ||||| || ||| | || |||| || ||||| || ||||| || Sbjct 15471 TCCTTCTGAATATTGTAGTCAGATAGGGTGCGGCCATCTTCAAGCTGCTTCCCGGCGAAG 15412 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || |||||||||||| | || | || |||||||| || || |||||| | Sbjct 15411 ATAAGACGTTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGGATTTTGGCCTTGACGTTT 15352 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || ||| ||| || || || | ||| || ||||| || ||||| ||||| ||| Sbjct 15351 TCAATACTATCAGAGGCTTCGACTTCTAGGGTGATCGTTTTACCAGTGAGGGTCTTTACA 15292 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 15291 AAGATCTGCATGTT 15278 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| || ||| |||||||| || || || || ||| | || |||| || Sbjct 15999 AACCAAGTGAAGAGTCGATTCCTTCTGAATATTGTAATCAGACAGGGTGCGGCCATCTTC 15940 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| |||||||| || || || || || || || | || | ||||||||||| Sbjct 15939 AAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTG 15880 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 || || ||||||| | || || ||| || || |||| ||| || ||||| Sbjct 15879 GATTTTGGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTCGAGGGTGATCGTTTT 15820 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | ||||| ||||| || ||||| Sbjct 15819 ACCAGTCAACGTCTTGACAAAAATTTGCAT 15790 >seq7750 Length=8304 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 ||||| |||||||| ||||| || || | || | || || ||||| |||||||| || Sbjct 2746 TCTTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCAAGCTGCTTTCCGGCGAAG 2805 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || || |||||| | || | || |||||||| ||||| || ||| Sbjct 2806 ATCAAACGCTGTTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTC 2865 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| ||| || || |||| ||| ||||| ||||| || |||||||||||| Sbjct 2866 TCGATTGTGTCAGAGGCTTCTACCTCGAGGGTAATGGTCTTTCCAGTAAGAGTCTTCACA 2925 Query 34971 AAGATCTGCAT 34981 ||||| ||||| Sbjct 2926 AAGATTTGCAT 2936 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| | || || | ||| | |||| || || ||||| ||||| ||||| | Sbjct 993 TTCCTCCACGCAGCCGGAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAG 1052 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 |||| | || |||| || ||||| |||||||| || || | |||||||| ||| | | Sbjct 1053 AAAGAGTGCGCCCATCTTCGAGCTGCTTTCCGGCGAAGATCAACCGTTGCTGATCTGGAG 1112 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || ||||| || ||||| ||||| | | || | || || || | Sbjct 1113 GAATTCCTTCCTTATCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCGGACGCTTCGA 1172 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | || ||||||||||| ||||| ||||| || ||||||||||| Sbjct 1173 CCTCAAGAGTGATGGTTTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 1221 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| || || | || | || || ||||| |||||||| || Sbjct 803 TCCTTCTGAATGTTGTAGTCGGAGAGAGTACGACCGTCTTCAAGCTGCTTTCCGGCGAAG 862 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | |||||||| ||| | || | || || ||||| ||||| ||||| | Sbjct 863 ATCAAGCGTTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGGATCTTGGCCTTGACATTT 922 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || || || || | || ||||||||||| ||||| ||||| || Sbjct 923 TCGATTGTGTCGGACGCTTCGACCTCAAGAGTGATGGTTTTTCCGGTGAGTGTCTTGACG 982 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 983 AAGATCTGCAT 993 >seq13049 Length=11502 Score = 98.7 bits (108), Expect = 6e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || || || ||| | || |||| || || ||||| || ||||| Sbjct 7384 TCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAG 7325 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || |||||||||||| | || | ||||| ||||| || || |||||| | Sbjct 7324 ATAAGACGTTGCTGGTCTGGAGGAATGCCCTCTTTGTCCTGGATTTTGGCCTTGACGTTT 7265 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || || ||| || || |||| || || ||||| || ||||| |||||||| Sbjct 7264 TCAATGCTGTCTGAGGCTTCGACTTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTCACG 7205 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 7204 AAGATCTGCATGTT 7191 Score = 98.7 bits (108), Expect = 6e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || ||| || || ||||| ||||| || ||| | || |||| || Sbjct 10518 ACCAAGTGCAGAGTCGATTCCTTTTGTATGTTGTAGTCAGACAGGGTGCGGCCATCCTCA 10459 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || ||||||||||| || || | ||| || || || | || | ||||| ||||| | Sbjct 10458 AGTTGTTTTCCGGCGAAGATCAATCGCTGTTGATCGGGAGGGATTCCCTCTTTGTCCTGA 10399 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||||| | || || ||| || || |||| || || ||||| Sbjct 10398 ATCTTGGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTCGAGAGTGATCGTTTTA 10339 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| |||||||| ||||||||||| Sbjct 10338 CCAGTGAGGGTCTTCACGAAGATCTGCAT 10310 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || || || ||| | || |||| || ||||| ||||| ||||| Sbjct 10272 TCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAG 10213 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || |||||||||||| | || | || |||||||| || || ||||||| Sbjct 10212 ATAAGACGTTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGGATTTTGGCTTTGACGTTC 10153 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || ||| ||| || || || | ||| || || || || || || ||||| ||| Sbjct 10152 TCAATACTATCAGAGGCTTCGACTTCTAAGGTAATTGTCTTGCCAGTAAGGGTCTTGACA 10093 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 10092 AAGATCTGCAT 10082 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || |||||| || ||||| ||||| || | | | || | || || Sbjct 10062 ACCAAGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCGGACAAGGTGCGGCCGTCTTCA 10003 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || ||||| || ||||| || || |||||||||||| | || || || ||||| Sbjct 10002 AGTTGTTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGAGGGGTTCCTTCTTTGTCCTGG 9943 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || ||||||| | || || ||| || || |||| || || ||||| Sbjct 9942 ATTTTAGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTCGAGAGTGATCGTTTTA 9883 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || ||||| |||||||| ||||||||||| || Sbjct 9882 CCAGTGAGGGTCTTCACGAAGATCTGCATGTT 9851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324577212361056