Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq2527 134 2e-26 >seq2527 Length=10055 Score = 134 bits (148), Expect = 2e-26 Identities = 395/604 (65%), Gaps = 10/604 (2%) Strand=Plus/Minus Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069 ||| |||||| |||| || |||| |||| ||| | | || |||||||| | | || Sbjct 5732 ATCAGCAACATATTCAATATATTGCGACATGAGTCGACAATTCATACCAATCATATCCAC 5673 Query 37070 TGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAAC 37129 ||||| || || ||| | | ||| ||| ||||| || | |||| | | Sbjct 5672 TGGAAGAGCTTCGGTTAGATACTCCTGTTCGATTTGAACAGCTTC---ACGTATAATTTC 5616 Query 37130 AATAACTT---CTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATC 37186 | |||| |||| ||||| | || | ||| || ||| ||||| |||||||| Sbjct 5615 ACACACTTGCTCTTCTGTTGGTTTTTGTTCGAGATACTTGTACACCAAACACGCAAAATC 5556 Query 37187 ACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAA 37246 | ||| | ||||||||||| || || || ||| || || || ||||| | Sbjct 5555 TCGATGGAGTCCTTCATCTCTTGAAATTAACTCGTTACTGTGTGTCAAACCCGGCATAAG 5496 Query 37247 ACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAAC 37306 || | ||| || | |||||| ||||| ||||| || ||||| || || || ||||| || Sbjct 5495 TCCACGTTTCTTCAGCCAAAAAATTGCAGCAAACGAGCCAGAGAAAAAGATTCCTTCCAC 5436 Query 37307 TGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttt 37366 ||| |||||||| |||| ||| | || || | | | | | || |||||||| | Sbjct 5435 TGCAGCAAATGCAACAACACGCATCCCAAATGAAGCATTCTTATTTTCAATCCATTGAAT 5376 Query 37367 tGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtt 37426 |||||||||||| || ||| | | | || | |||||| || ||||| || Sbjct 5375 TGTCCAATCTGCTTTCTTTTTTATATACGGAAAGTCGTGAATTGCGTTGAAGAGTGTATT 5316 Query 37427 tttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAAT 37486 || ||| | ||| | || || || || || | | |||||||||||||||||| Sbjct 5315 TTGTTCGACTGGATCGTTAATGTACGTTTCGATCAATTTCGAATACATTTCAGAGTGAAT 5256 Query 37487 ATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGT- 37545 ||| | || ||||||||| || ||| | || |||| | | || || | Sbjct 5255 TCCTTCCACTGCAATCTGAAAATTGTAGAAAGAGAGTGCCTCAGGCATCTTCACTTCTTG 5196 Query 37546 TAAAAAACCTCTTAGCTAAG-TTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCA 37604 | ||||| || | | || |||||||| || || ||||| ||||||||| || ||| Sbjct 5195 TGTAAAACGTCCAA--TGAGATTTTCATTTACGATTCCATCTGAAGCTGCAAAAAATGCA 5138 Query 37605 AGAA 37608 |||| Sbjct 5137 AGAA 5134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592211278762080