Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_017985.1 Length=40128 Score E Sequences producing significant alignments: (Bits) Value seq2795 201 3e-47 >seq2795 Length=11366 Score = 201 bits (222), Expect = 3e-47 Identities = 411/598 (69%), Gaps = 16/598 (3%) Strand=Plus/Minus Query 18004 AATGGCTAACCTACGCAAAGAAGCGCGCGGCAGAGAATGCCAGGTACGTATTTACGGCGT 18063 |||||| || ||||||||||||||||| || ||||||| ||||| | || ||| | Sbjct 3919 AATGGCAAATCTACGCAAAGAAGCGCGGGGTCGAGAATGTCAGGTCAGAATACCGGGCAT 3860 Query 18064 ATGCAATGGCAACCCTGAAACTACAGTTCTGGCACATTACCGGATGGCTGGAATTTGCGG 18123 || || || ||| ||||| ||||||||| ||||||||||||||||| ||||| || Sbjct 3859 CTGTAACGGTAACAGCGAAACGGTAGTTCTGGCTCATTACCGGATGGCTGGCATTTGTGG 3800 Query 18124 AACTGGAATGAAGCCTGACGACCTGATCGGCGCATGGGCTTGTAGCGCGT-GTCACGATG 18182 | || ||||| || | || ||| | || |||||||| ||| || || ||||||||| Sbjct 3799 CATGGGGATGAAACCCAATGATCTGTTTGGGGCATGGGCGTGTT-CGTGTTGTCACGATG 3741 Query 18183 AAATCGACCGACGCACCCATAATCTCGACA-ACAAAGAC--GCCAGACTTTAC-CACCTC 18238 |||| ||||| | || | || |||| | | ||| || || | | ||| | Sbjct 3740 AAATAGACCGCAGAAC---GAGGCT-GACAGAGACCGACTATGCACACATGGCTCACTTA 3685 Query 18239 GAAGGCGTGATCAGGACGCAGGCGATACTGCTGAAGGAGGGGAAGATTAAGTCATGAAAA 18298 || || || ||||||||||| | ||| |||| |||||| |||||| | | |||||| Sbjct 3684 GAGGGTGTAATCAGGACGCAATCAATATTGCTATCGGAGGGTAAGATT-TGACGTGAAAA 3626 Query 18299 CATACCGAATAAAATTGCCGTGGCCTCCTTCAAACAACCGATATTGGCGACACTCAAGAG 18358 | ||| ||||||||||||||||||| || || | |||||| |||||||||| Sbjct 3625 CCTACAATTTAAAATTGCCGTGGCCTCCGACAGTTAATCACTATTGGAAACACTCAAGAT 3566 Query 18359 GGATCCACTAC--ATCAGCGATTGGGGAAAGCGATACCGGCGAGAAGTAATCGAAATAAT 18416 || |||||| ||||| || || | | ||||| | || | | | | || || Sbjct 3565 GG-GGCACTACATATCAGAGAAAGGCATTAAC--TACCGACAGCAAATCAGCAACATCAT 3509 Query 18417 TCAGCAACAACAGCTAGACCTTAAAATCACACCCCGCATCAGAATCACCATTCTCGCAGC 18476 |||||| ||| | || | || | | | ||||||||| ||||| || | || Sbjct 3508 TCAGCAGCAAAACCTCAGTATCAATACCCAATCCCGCATCAAAATCAAAATAGTTGCCAA 3449 Query 18477 ACCTCCCGATAACCGCAAACGCGACCTGGACAATCTACCAAAGGCCGTTTTTGACGCACT 18536 || || || | || | | ||||| || || || || || || ||||| ||| | || Sbjct 3448 TCCCCCAGACAGACGACAGAGAGACCTCGATAACCTGCCTAAAGCGGTTTTCGACTCGCT 3389 Query 18537 CACTAGTGCGGGCTTCTGGCTGGATGACGGCCAGATAGACGATATGCGCATCAAGCGC 18594 ||| ||| || |||||| |||||| ||| | || ||||| ||||||| ||| Sbjct 3388 GACTCATGCTGGATTCTGGGCTGATGACAATCAGGTTGATTATATGAGCATCAAACGC 3331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128266288218160