Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_018454.1 Length=39974 Score E Sequences producing significant alignments: (Bits) Value seq4764 1081 0.0 seq10737 196 1e-45 >seq4764 Length=15780 Score = 1081 bits (1198), Expect = 0.0 Identities = 1426/1966 (73%), Gaps = 27/1966 (1%) Strand=Plus/Plus Query 17010 ATGGCACTCACCGACAAACAAGAAATGTTCTGTCGCGAGTACCTCATCGACTTAAACGCC 17069 ||||||||||||||||||||||| ||||| ||||||||||||||| | || || |||||| Sbjct 1426 ATGGCACTCACCGACAAACAAGAGATGTTTTGTCGCGAGTACCTCGTTGATTTGAACGCC 1485 Query 17070 ACACAGGCGGCGATTCGGGCGGGGTACAGCGTCAAAACGGCTAACCGCACCGCCTCCGAA 17129 ||||| ||||| ||||| ||||||||||||| || || || || || | || |||||| Sbjct 1486 ACACAAGCGGCCATTCGTGCGGGGTACAGCGAGAAGACAGCAAATCGTATTGCGTCCGAA 1545 Query 17130 AACCTGTCAAAACCTGACATCCAAAACAGAATCGCTGAACTCAA-GAATAAGCGCAACGA 17188 ||||||||||||||||| ||||| ||||||| ||||| || | | || ||||| || Sbjct 1546 AACCTGTCAAAACCTGATATCCAGTCACGAATCGCAGAACTAAAAGCAGAA-CGCAATGA 1604 Query 17189 GGACGTGGGTATAAATGCTGCTTATGTGCTCCAGCGCTTAGTTGAGATTGACCAGATGGA 17248 || || || | ||||| | ||||| | |||| | ||||| |||||||| ||||| Sbjct 1605 AGAGGTTGGAGTTAATGCCACCTATGTATTAAAGCGGCTGGTTGAAATTGACCAAATGGA 1664 Query 17249 CGTGGCCGACATTCTCAACGATGACGGATCGTTAAAGGCTGTTAGCCAGTGGCCCAGATG 17308 ||| ||| ||||||| ||| ||| | || | || | | ||||||| | Sbjct 1665 TGTGCTCGATATTCTCACTGATAGTGGAGAACTCAAACCCGTAAAAGACTGGCCCAAAGT 1724 Query 17309 CTGGCGTATCACGCTACAGGGCATCGACCTGGCTTCGACTATTCGCAACTTTGACGAGGA 17368 ||||| | || || || | || | | | ||| || | || || | Sbjct 1725 ATGGCGCACAACCTTATCTGGTCTGGAAGTTGTTGAGACAG---GC-----TCACAAG-A 1775 Query 17369 AACCGAAGAGACGATCCTCAAAAAGATTAAATGGCCGGACAAAGTTAAGAACCTGGAACT 17428 || | | || | ||||| ||||| || |||||||| || || ||||| ||||| || Sbjct 1776 TACAGCCG---CGTTACTCAAGAAGATAAAGTGGCCGGATAAGGTGAAGAATCTGGAGCT 1832 Query 17429 GCTTGGCAAACACGTAGATGTTCAGGCGTTCCGTGAACAGGTGAAAACCAATCACACCGT 17488 || ||||| || | |||||||| |||||||| ||||| |||| | || || Sbjct 1833 TCTCGGCAAGCATATCAGCGTTCAGGCATTCCGTGAGCAGGTCAAAAATGAGCATGATGT 1892 Query 17489 TGATTCA---CTTTCCGACCTGATGGATGAGCTTTC-AGGGGGTGCCTGATGGCGCTTAG 17544 || | || || || |||||||| || ||| | | ||||| | ||| || Sbjct 1893 TGTCGGAACGCTATCTGAGCTGATGGACGATCTTGCCAAGGGGTAA-TCATGAAGC---- 1947 Query 17545 ACCTGAACACCTCGCACGGCTAAGGGATAAATTCTGGCGGCTTAACCACCTGTACTGGAT 17604 | |||||||||||| || | ||||| ||||| |||| || | || || ||||| Sbjct 1948 --CGGAACACCTCGCATTACTGCGCGATAAGCTCTGGAGGCTGAATAATCTCTATTGGAT 2005 Query 17605 CACCGACAAACGCGGGAAGCCGGTACGTTTCAAAATGACCCCGGAGCAGTTGGCCTACTT 17664 || || ||| |||||| | | || || || ||||| ||||| ||||| | || || Sbjct 2006 TACGGATAAAGAAGGGAAGACTATCCGGTTTAAGATGACACCGGAACAGTTAGAGTATTT 2065 Query 17665 CGAGGGGATGCATACACGAAACATCATCCTGAAAGCGCGCCAGCTCGGTTTTACAACGCT 17724 || || ||||| || || || ||||| |||||||| || ||||| ||||| || || Sbjct 2066 TGAAGGAATGCACACCCGCAATATCATTCTGAAAGCACGACAGCTTGGTTTCACGACTGA 2125 Query 17725 GGTGTGCATCATTCAGCTCGATGCCGCGCTCTTTGAGGGCGCAAAGTGCGCGCTTATCGC 17784 ||||||||| |||||||| || || ||||| |||||| || |||||||| || || || Sbjct 2126 GGTGTGCATTATTCAGCTTGACGCAGCGCTATTTGAGTCAGCTAAGTGCGCCCTGATAGC 2185 Query 17785 TCACACCCTCAATGACGCAAAGCGCCTTTTCCGGGAGAAAATCAAATATGCCTATGATCG 17844 ||||| | || || || |||||||| ||||| ||||| ||||||||||||| || || Sbjct 2186 CCACACGTTAAACGATGCTAAGCGCCTGTTCCGTGAGAAGGTCAAATATGCCTACGACCG 2245 Query 17845 ACTGCCTGCTGAGATCCGGGCGGCTAATCCTGCGTCTAATGATGCCGCTGGCGAGCTGGT 17904 | | || | |||||| ||| || || ||||| ||| ||||| |||| ||||| || Sbjct 2246 ATTACCGGATGAGATTAAGGCCGCCAACCCTGCTAGTAACGATGCATCTGGGGAGCTAGT 2305 Query 17905 TTTTAAGAAGGGCGGCTCGCTCTATGTTTCGACATCGTTTCGTGGCGGCACGCTGCGCTA 17964 ||| |||||||| || || ||||| || || ||||||||||| |||||||||||||| Sbjct 2306 CTTTCGCAAGGGCGGTTCACTGTATGTATCAACCTCGTTTCGTGGTGGCACGCTGCGCTA 2365 Query 17965 TCTTCATGTGTCCGAGTTCGGGAAGATCTGCGCAAAGTACCCGGACAAGGCGCGCGAAAT 18024 ||| |||||||| ||||||||||| || || || |||| ||| ||||| || | ||||| Sbjct 2366 TCTGCATGTGTCGGAGTTCGGGAAAATTTGTGCCAAGTTCCCCGACAAAGCCAGAGAAAT 2425 Query 18025 TGTCACTGGTGCTTTTGAAGCTGTTTCAACTGACTGTTTCACGACGATTGAAAGCACAGC 18084 |||||| || || |||||||| || ||||| ||||||||||| ||||||||||| ||||| Sbjct 2426 TGTCACCGGGGCATTTGAAGCGGTATCAACGGACTGTTTCACCACGATTGAAAGTACAGC 2485 Query 18085 AGAAGGCCGCGCGGGCTATTTCTTCGATTATTGCCAGACTGCGGAAAAAGCGGCGCTATC 18144 |||||| || ||||| || ||||| ||||| || ||||| || || |||||| | | Sbjct 2486 AGAAGGGCGAGCGGGATACTTCTTTGATTACTGTCAGACGGCAGAGAAAGCGCAGATGCA 2545 Query 18145 TGGTGCGCCCCTCTCTCAACTGAGCTGGAAATTCTTCTTTTTCAGCTGGTGGATGAACCC 18204 ||| || | ||| | || |||||| || ||||||||| ||||||| ||| || Sbjct 2546 GGGTAAGCAATTATCTAACCTCGACTGGAAGTTTTTCTTTTTCTCGTGGTGGAAGAATCC 2605 Query 18205 CCAGTATGCAATCGACCCCGTAGAGCCGCTATCACAGCGCCTGCGCGATTATTTCGATGA 18264 | ||||| || ||||| || || || || | |||||||| || |||||||||| || Sbjct 2606 GCTCTATGCCATTGACCCGGTGGAACCAATACCGCAGCGCCTACGTGATTATTTCGCAGA 2665 Query 18265 GCTGGAGGCAAAGCACCGCCTTACGCTCAACGACCGCCAGAAAGCGTGGTATCAGGCCAA 18324 |||| | | |||||| | | || || | || || || || || |||||| ||||| Sbjct 2666 GCTGCAAGGTAAGCACGGTATCACACTGACTGAACGTCAAAAGGCTTGGTATTTCGCCAA 2725 Query 18325 AGAAACCACCCTCGGCGACGACATGAAACGGGAATACCCGTCTATCCCCGCCGAGGCGTT 18384 ||||| || |||||||| |||||||| |||||||||||||| |||||| | ||||| || Sbjct 2726 AGAAAAGACGCTCGGCGATGACATGAAGCGGGAATACCCGTCGATCCCCTCTGAGGCATT 2785 Query 18385 CCAGCAGTCCGTTGAAGGCGCTTACTACGCGAAACAGTTCGCGTTTCTCTACGCACAGCG 18444 |||||| || || ||||||||||||||||| || || ||| | || || | | | Sbjct 2786 CCAGCAATCAGTAGAAGGCGCTTACTACGCCAAGCAATTCCGCTGGCTGTATGAAAACAA 2845 Query 18445 CCGCATCGGCCAGTTGCCGGATAACGATCACCTTCCTGTTTACACGTTCTGGGATATCGG 18504 ||||| ||| | || ||||||||| || || || ||| | || ||||||||||| || Sbjct 2846 ACGCATTGGCAAATTACCGGATAACTCACATCTGCCCGTTCATACCTTCTGGGATATTGG 2905 Query 18505 CGTCGGTGACTCAACGGCTATCTGGTTTGTGCGCGTGGTGGGGAACGAGTTCCACATCAT 18564 || ||||| |||||| |||||||||| ||||| | || || | |||||||||||||| Sbjct 2906 GGTGGGTGATTCAACGTCTATCTGGTTCGTGCGTGAAGTCGGAGAAGAGTTCCACATCAT 2965 Query 18565 CGACTACTACGAGAACAGCGGCGAAGGGCTTCGCCATTACATGAAGATCCTTAAAGAAAA 18624 |||||||||||||||| |||||||| | || || ||||||||| | | || || || Sbjct 2966 CGACTACTACGAGAACTCTGGCGAAGGCTTGCGGCACTACATGAAGGTGTTGAAGGACAA 3025 Query 18625 GGGATACACCTACGCCGAACACTGGGCGCCCCACGATATAGACAACCGCGAGTTTGCGAA 18684 || || | ||||| || || |||| ||| || ||||| || ||||| ||||||| || Sbjct 3026 AGGCTATATCTACGGTGATCATTGGGGGCCACATGATATCGATAACCGTGAGTTTG-GAT 3084 Query 18685 C-GACGGCAAATCCCGCCGCCAGCTTGCGCGTGAGGGTTATGAGGTGGACGGCGAAATCT 18743 | || | || || || || | || |||||||| || || || | ||||| | | | Sbjct 3085 CTGATGCTAAGTCTCGACGAGAACTGGCGCGTGAAGGGTACGAAATCGACGGTCAGAAAT 3144 Query 18744 ATTCGATCTCGTTCAGTGTGGTGCCGAAGCTCGGTGTTGCTGAGGGGATCGAGCTGGTGC 18803 | || || |||| || ||||| ||| | ||||| | | || || || ||||| Sbjct 3145 ACTCAATGATATTCAAGGTTGTGCCAAAGGTTGGTGTGGATACTGGCATAGAATCGGTGC 3204 Query 18804 GCGAAATCCTGCCCCGCTGCGCTTTTGACAGCGTGAAATGCGAGGAAGGGATAAGCCACC 18863 | ||||||||| || |||| ||||| | ||||||| || |||||| || | Sbjct 3205 GTGAAATCCTGTCCAATTGCGTATTTGATGAAGAGAAATGCAGTGAGGGGATATCTCATC 3264 Query 18864 TGGAAGCCTACCGCAAGGAGTGGGATGCCAAGCGCGGCTGCTGGAAAGACAACCCTTTGC 18923 ||||| |||||| || || ||||||| ||||||||| ||||||||||| || || | | Sbjct 3265 TGGAAAGCTACCGTAAAGAATGGGATGACAAGCGCGGTTGCTGGAAAGATAAGCCACTTC 3324 Query 18924 ACGACTACACCTCGCACGCTTCGGACGGTTTCCGCTACTTCGCTGT 18969 | |||| ||| || || | | | || || ||||| || || || || Sbjct 3325 ATGACTTCACATCACATGGTGCTGATGGCTTCCGTTATTTTGCGGT 3370 Score = 125 bits (138), Expect = 2e-24 Identities = 285/425 (67%), Gaps = 8/425 (2%) Strand=Plus/Plus Query 19718 CGCTGACCGATCTGCCGTGGTCATGGATTGGCGCGGCCAATAACGACCACACGCCGGATG 19777 || || | || ||||||||||||||||||||| | ||||| |||||||||||||||| Sbjct 4100 CGTTGCCTGAGCTGCCGTGGTCATGGATTGGCTCAATGAATAATGACCACACGCCGGATG 4159 Query 19778 TTCCGCCGCTGGCGGATATCGCCTCGATGAACATCAAGCACTACCAGGCCGAAGCGGATA 19837 || ||| | || || || || | |||| || || ||||| ||||| || || || | Sbjct 4160 CGCCACCGTTAGCTGACATTGCTTATGTGAATATTAAACACTATCAGGCTGAGGCTGACA 4219 Query 19838 TCGCCGAGATTGCCCAC-CTGTGCGGGAATCCGACCCCTACCGTTTCCGGGCTTACAGAA 19896 |||| || || ||| | || |||| | |||| | | | | || || | || Sbjct 4220 TCGCGGAATCAGCGCACACAGT-CGGGCAGCCGATGGTTGCGTTAACAGGTCTCAATGAG 4278 Query 19897 CCCTGGGCAGATAAATACCTGAAAGAAGGGATTCGCATCGGCTCAACAACCGGCGTGCTT 19956 ||||| ||||| || | || || || | | ||||| | || || ||| Sbjct 4279 GAGTGGGCGGATAAGTATTTCTCTGATGGATTTACCGTTGGCTCGCGCAGTGGTGTTCTT 4338 Query 19957 CTGCCTGC---TGGCGGGAAACTCGATATCGTCCAGGCCGAAGATCGCAACCTGCCGATT 20013 |||||| | ||||| | | | | | ||| | ||||| ||||| | | ||| Sbjct 4339 CTGCCTCCAAATGGCG---ATATGAAATTTGCACAGCCGGAAGAACGCAATATTCAGATA 4395 Query 20014 GTCGTCGCCGAACGTCGCGAGAAACAGATGGCGATGCTCGGCGCGAAGCTGGTGGAGCGC 20073 || || ||||| || || || || ||||| ||||| |||||||| ||| | || || Sbjct 4396 ACTGTAGCGGAACGACGGGAAAAGCAAATGGCAATGCTGGGCGCGAAACTGATAGAACGT 4455 Query 20074 GGCACCGCAGCCAGGACAGCCACGCAGGCCGCCGATGAGGCGCAGACCGATAACTCTATC 20133 || || |||| | ||||| || ||||| | |||||||| || |||||||||||| Sbjct 4456 GGTACATCAGCACGAACAGCAACACAGGCACAAAACGAGGCGCAAACAGATAACTCTATC 4515 Query 20134 CTGTC 20138 |||| Sbjct 4516 TTGTC 4520 >seq10737 Length=14001 Score = 196 bits (216), Expect = 1e-45 Identities = 619/954 (65%), Gaps = 29/954 (3%) Strand=Plus/Plus Query 33438 ATTGACGCGAAGCTGCGCTATCCGAACACCGCCTTACTCTACATGGAATTTGATTCGAGC 33497 |||||||| || ||| | || || | ||||||||| | | | | | |||||| | | Sbjct 8504 ATTGACGCTAAACTGAGTTACCCCGAAACCGCCTTATTGTTCGTTCAGTTTGATGCCAAA 8563 Query 33498 CAGTTTAACGGCTCTATTCCGCAAATCTCCTGCGAGCCGCGCGGGCGTGTCATTCGCGTT 33557 ||||| | || ||| ||||| ||||||| || || ||| | || || || Sbjct 8564 CAGTT---CCGCAATATCCCGCAGGTCTCCTGTGAACCCAAAATGCGCATTATCCGGGTG 8620 Query 33558 CCTGCGAACTATGACCCCGACACCCGCAGCTATACCGGCACCTGGGATGGCACGTTTAAA 33617 || | || ||||| || ||| |||| |||| | || |||| || | |||||| Sbjct 8621 CCGGATAATTATGATCCGGACCGTCGCACCTATTCGGGGGTGTGGGCAGGGGCCTTTAAA 8680 Query 33618 TGGGCGTGGACGGATAACCCGGCCTGGGTGTTTTACGACCTGGTGATCACTGATCGCTTC 33677 ||||||||||| || || ||||| ||| | | || |||||| |||||| ||| || ||| Sbjct 8681 TGGGCGTGGACAGACAATCCGGCGTGGATACTGTATGACCTGATGATCAATGACCGGTTC 8740 Query 33678 GGACTCGGCGACCGGCTGGACGCCGATAA-----CG-TGGACAAATGGGCGCTCTACCAG 33731 | | || |||| || | || || || || ||| ||||||| || |||| Sbjct 8741 AGCATTGGTACCCGGGTGAAAGCTGAGAATCTGGCGCTGGCAAAATGGGACCTGTACCGC 8800 Query 33732 GTGGCGCAATACTGCGATCAGATGGTGCCGGACGGCAGGGGCGGCGACGGCAAAGAGCCA 33791 | || | |||| || ||| ||||||||| |||| || || || || ||| || Sbjct 8801 ATTGCCCGGCACTGTGACCAGCCGGTGCCGGATGGCAAAGGGGG-GATGGAGCCGAGACA 8859 Query 33792 CGCTATATGTGCAACGTCTACGTGCAGAGCCGGGCCGACGCATTCACGGTTTTGCGCGAC 33851 | | ||||| ||||| | ||| | | ||||| | || || |||| || Sbjct 8860 CACC-----TGCAATGTCTATATTCAGTCGCAAGAGGACGCCTGGACTGTCCTGCGGGAT 8914 Query 33852 TTTGCGGCCATCTTCCGGGGCATGACTTACTGGGGTGGCGATCAGCTCGTTACGCTGGCA 33911 ||| | |||||| |||||||| | ||||| | || | | | |||||| Sbjct 8915 ATTGTCGGTATCTTCAACGGCATGACCTTCTGGGCGAACAATAACATGAATGTGCTGGCG 8974 Query 33912 GACATGCCGCGCGATGTTGATTATGTCTACACGCGCGCGAATGTGGTTGAAGGGCGCTTC 33971 || ||||| ||| || |||| || ||| ||||| || ||| || || || Sbjct 8975 GATATGCCCCGCACGGTGGATTTAAACTTCACCCGCGCCAACGTGCGGGACGGTAAATTT 9034 Query 33972 ACTTACGCCAGCAGCACACTAAAAGCCCGCTACTCAACCGCGCTGGTGAGCTGGTCTGAT 34031 || || |||| || ||| ||| ||||| || ||| ||||||||||||| ||| Sbjct 9035 ACCTATTCCAGTGCCAGCGAGAAAACCCATTACTCCACGGCGATGGTGAGCTGGTCAGAT 9094 Query 34032 CCCGATAACCAGTACGCTGACGCGATGGAACCCGTATTCGAGCCGGATCTGGTTAA---- 34087 || | ||| || || ||| ||||| | || ||||| || | ||||| Sbjct 9095 CCGCAGAACGGTTATCAGGATGCGGTGGAAGCGGTCTTCGACCCTCA----GTTAATGCG 9150 Query 34088 CCGCTACGGCGTTAACCAGCTTGAGATAACCGCCATTGGTTGCACCCGGCAGAGCGAGGC 34147 ||| || || || ||| || || ||||| ||||| |||||||||||||| ||||| Sbjct 9151 CCGGTATCAGGTGAAACAGGCGGACATCACCGCAATTGGCTGCACCCGGCAGAGTGAGGC 9210 Query 34148 CAACCGAAAAGGCCGCTGGGGCATCCTGACGAACAACCG---TGATCGCATCGTGACGTT 34204 | | || ||| |||| | ||| | ||||| ||| || || || || || Sbjct 9211 CCAGCGGCGCGGCAAGTGGG---TACTGTATACCAACCAGTATGACCGGATGGTCACCTT 9267 Query 34205 CGCGGTGGGGCTGGACGGCAACATCCCGCTGCCCGGTTATATCATCGCCGTGGCAGATGA 34264 | ||||||||||| ||| || ||| ||||||||||||| |||| ||||| ||||| Sbjct 9268 TACCGTGGGGCTGGAGGGCCGAATTCCGTTGCCCGGTTATATTATCGGGGTGGCGGATGA 9327 Query 34265 AATGCTTTCCGGGCGTGTGATGGGCGGCAGGATCAGCGCCGTGGATGGCCGGACGGTGAC 34324 | | ||||| || || |||| || | |||||||| | ||||| || | | || Sbjct 9328 AGCCTTCTCCGGTCGCGTACTGGGTGGGCGTATCAGCGCGGCTGATGGACGTAATATCAC 9387 Query 34325 TCTCGACCGCGTGCCAGCGGCGAAAAAAGATGATCGGTTACTGGTGAATCTCCC 34378 || ||| | ||| | |||| || | || |||||| | |||| || || Sbjct 9388 GCTGGACAGAGTGTCTTCGGCACAAGTGGGCGAGCGGTTAATCCTGAACCTGCC 9441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127773571620864